Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq4 156 5e-33
>seq4
Length=3244807
Score = 156 bits (172), Expect = 5e-33
Identities = 449/677 (66%), Gaps = 14/677 (2%)
Strand=Plus/Plus
Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293
||||| | || | |||||| || | || | || || ||||| || || || || | |
Sbjct 1908486 GGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACC 1908545
Query 63294 CAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63352
|||||||| ||| || || || | | | ||||| || || |||||| |
Sbjct 1908546 CAAAGAGC-ATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAA 1908604
Query 63353 ATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAG 63411
|| ||||| || | | | || | |||||||| |||| ||| ||||| | | || |
Sbjct 1908605 GTCAAGGAA-GCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCG 1908663
Query 63412 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 63471
| || ||||| || ||||| || | ||| ||||| ||||| || || || | | ||| |
Sbjct 1908664 GACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAG 1908723
Query 63472 GAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT-- 63529
|||| | |||||| || |||| ||||| || ||| || || ||||||||||
Sbjct 1908724 GAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGC 1908783
Query 63530 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-A 63588
| | | || | |||| || || || || | || ||||| | ||||| ||| || |
Sbjct 1908784 AGTGCACGTTCA--GACCAATACCGCCAGCAGTCTTGGAGATCATGGCGCA-CGTCTTCA 1908840
Query 63589 ACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACA 63648
||||||| ||||| || || ||||| || || |||||| | || || || ||||
Sbjct 1908841 ACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACA 1908900
Query 63649 TTTG--GTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 63706
|||| | |||| || || |||||||| || | || || ||||||||||| || | ||
Sbjct 1908901 TTTGAGGAGACG-GT-GTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTT 1908958
Query 63707 TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63766
| || | | | ||| ||||| ||||| || |||||| || || || ||
Sbjct 1908959 CTGCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCAC 1909018
Query 63767 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAA 63826
|| |||||||| | ||||||||| || | || | | ||| || || | |
Sbjct 1909019 AGCTACACGCATCAGCATGTGCTGTGGACGCTCGGCTACCTTGCCATTGATGCGGAGAAG 1909078
Query 63827 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63886
||| ||| |||| || || || ||||| | | ||| ||||| || ||||| |
Sbjct 1909079 GTATGATCGCTCCAGGGTCTTGAACCCAAAGAATTGGTAGTTGAAGTCGCGGTCGTATAC 1909138
Query 63887 AATAACCGAATTGAGCT 63903
|||| |||| |||||||
Sbjct 1909139 AATAGCCGAGTTGAGCT 1909155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817119764080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |