Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq4 156 5e-33 >seq4 Length=3244807 Score = 156 bits (172), Expect = 5e-33 Identities = 449/677 (66%), Gaps = 14/677 (2%) Strand=Plus/Plus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 ||||| | || | |||||| || | || | || || ||||| || || || || | | Sbjct 1908486 GGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACC 1908545 Query 63294 CAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63352 |||||||| ||| || || || | | | ||||| || || |||||| | Sbjct 1908546 CAAAGAGC-ATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAA 1908604 Query 63353 ATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAG 63411 || ||||| || | | | || | |||||||| |||| ||| ||||| | | || | Sbjct 1908605 GTCAAGGAA-GCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCG 1908663 Query 63412 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 63471 | || ||||| || ||||| || | ||| ||||| ||||| || || || | | ||| | Sbjct 1908664 GACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAG 1908723 Query 63472 GAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT-- 63529 |||| | |||||| || |||| ||||| || ||| || || |||||||||| Sbjct 1908724 GAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGC 1908783 Query 63530 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-A 63588 | | | || | |||| || || || || | || ||||| | ||||| ||| || | Sbjct 1908784 AGTGCACGTTCA--GACCAATACCGCCAGCAGTCTTGGAGATCATGGCGCA-CGTCTTCA 1908840 Query 63589 ACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACA 63648 ||||||| ||||| || || ||||| || || |||||| | || || || |||| Sbjct 1908841 ACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACA 1908900 Query 63649 TTTG--GTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 63706 |||| | |||| || || |||||||| || | || || ||||||||||| || | || Sbjct 1908901 TTTGAGGAGACG-GT-GTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTT 1908958 Query 63707 TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63766 | || | | | ||| ||||| ||||| || |||||| || || || || Sbjct 1908959 CTGCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCAC 1909018 Query 63767 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAA 63826 || |||||||| | ||||||||| || | || | | ||| || || | | Sbjct 1909019 AGCTACACGCATCAGCATGTGCTGTGGACGCTCGGCTACCTTGCCATTGATGCGGAGAAG 1909078 Query 63827 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63886 ||| ||| |||| || || || ||||| | | ||| ||||| || ||||| | Sbjct 1909079 GTATGATCGCTCCAGGGTCTTGAACCCAAAGAATTGGTAGTTGAAGTCGCGGTCGTATAC 1909138 Query 63887 AATAACCGAATTGAGCT 63903 |||| |||| ||||||| Sbjct 1909139 AATAGCCGAGTTGAGCT 1909155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817119764080