Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq4 158 2e-33
>seq4
Length=3244807
Score = 158 bits (174), Expect = 2e-33
Identities = 356/528 (67%), Gaps = 8/528 (2%)
Strand=Plus/Plus
Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230
|||||||| |||| ||| ||||| | | || || || ||||| || ||||| || | |
Sbjct 1908630 TGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACG 1908689
Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290
|| ||||| ||||| || || || | | ||| ||||| | ||| ||||| ||||| |||
Sbjct 1908690 TACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTG 1908749
Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCCC 66348
|| || ||| || || | |||||||| | | | || | |||| || || |
Sbjct 1908750 GTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCA--GACCAATACCGC 1908807
Query 66349 CTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTATCATAGATGCCCTCTATACTA 66407
| || | || ||||| | ||||| ||| || ||||| || ||||| ||||| || ||
Sbjct 1908808 CAGCAGTCTTGGAGATCATGGCGCA-CGTCTTCAACGTGTCGTAGATACCCTCGATGCTG 1908866
Query 66408 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA-GTTCCCGCATT 66466
|| ||| |||||| | || || || |||||||| || ||| || ||||||||
Sbjct 1908867 TCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGA-GACGGTGTACCCGCATT 1908925
Query 66467 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 66526
|| | || || ||||||||||| || | || | || | | | ||| ||||| ||
Sbjct 1908926 GAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGAT 1908985
Query 66527 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 66586
||| || |||||| || || || || || |||||||| | ||||||||| ||
Sbjct 1908986 AGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTGG 1909045
Query 66587 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 66646
| || | | |||| || || | | ||| ||| |||| || || || ||
Sbjct 1909046 ACGCTCGGCTACCTTGCCATTGATGCGGAGAAGGTATGATCGCTCCAGGGTCTTGAACCC 1909105
Query 66647 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694
||| | | ||| ||||| || ||||| | |||| ||||||||||
Sbjct 1909106 AAAGAATTGGTAGTTGAAGTCGCGGTCGTATACAATAGCCGAGTTGAG 1909153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172298143240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |