Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4 158 2e-33 >seq4 Length=3244807 Score = 158 bits (174), Expect = 2e-33 Identities = 356/528 (67%), Gaps = 8/528 (2%) Strand=Plus/Plus Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230 |||||||| |||| ||| ||||| | | || || || ||||| || ||||| || | | Sbjct 1908630 TGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACG 1908689 Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290 || ||||| ||||| || || || | | ||| ||||| | ||| ||||| ||||| ||| Sbjct 1908690 TACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTG 1908749 Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCCC 66348 || || ||| || || | |||||||| | | | || | |||| || || | Sbjct 1908750 GTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCA--GACCAATACCGC 1908807 Query 66349 CTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTATCATAGATGCCCTCTATACTA 66407 | || | || ||||| | ||||| ||| || ||||| || ||||| ||||| || || Sbjct 1908808 CAGCAGTCTTGGAGATCATGGCGCA-CGTCTTCAACGTGTCGTAGATACCCTCGATGCTG 1908866 Query 66408 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA-GTTCCCGCATT 66466 || ||| |||||| | || || || |||||||| || ||| || |||||||| Sbjct 1908867 TCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGA-GACGGTGTACCCGCATT 1908925 Query 66467 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 66526 || | || || ||||||||||| || | || | || | | | ||| ||||| || Sbjct 1908926 GAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGAT 1908985 Query 66527 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 66586 ||| || |||||| || || || || || |||||||| | ||||||||| || Sbjct 1908986 AGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTGG 1909045 Query 66587 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 66646 | || | | |||| || || | | ||| ||| |||| || || || || Sbjct 1909046 ACGCTCGGCTACCTTGCCATTGATGCGGAGAAGGTATGATCGCTCCAGGGTCTTGAACCC 1909105 Query 66647 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 ||| | | ||| ||||| || ||||| | |||| |||||||||| Sbjct 1909106 AAAGAATTGGTAGTTGAAGTCGCGGTCGTATACAATAGCCGAGTTGAG 1909153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172298143240