Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq7 102 7e-17
>seq7
Length=2328918
Score = 102 bits (112), Expect = 7e-17
Identities = 327/502 (65%), Gaps = 49/502 (10%)
Strand=Plus/Plus
Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936
||||| ||| |||||| | ||| |||| |||||| | | || | || |||
Sbjct 1959963 ATCTTTAGCGTCGGAAAGTCCCTCGGCTCCCTCTCCAGCTGGACCTTCAACGCGTCGACG 1960022
Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG-GTCAG--- 20992
|||| | ||| ||||| || || |||| || ||| ||| ||||||| || ||
Sbjct 1960023 TGGTCGACGTACACGTGCGCATCGCCCATCGTATGCGTAAAAG-TCCCGGGCGTGAGATC 1960081
Query 20993 GCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGAC 21052
|| || ||||||| | || | || || || || ||||| |||||||| || |||||
Sbjct 1960082 GCACG---CGTGAGCCAGCATGTGGGTTAGCAGCGCATAGCTCGCGATGTTGAAGGGGAC 1960138
Query 21053 CCCGAGGCCCATGTCGGCGGACCTCTGGTACAG----CTG-GCAGGACAGCTCCC----- 21102
|| || ||||||||| | || |||||| || ||| |||| || | | |
Sbjct 1960139 GCCAAGCCCCATGTCGCAGCTCCGCTGGTAAAGGATACTGTGCAGCACGCCCCTCTTCCT 1960198
Query 21103 -------CCC-------------GA---GCCACGTAAAACTGACACAAA-ACGTGACAAG 21138
||| || | |||||| || || | |||| | ||| ||||
Sbjct 1960199 CTCCTCACCCTCTTTCGCCTGCGGAAACGACACGTAGAATTG-CGCAAACATGTGGCAAG 1960257
Query 21139 GAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGAT 21198
| ||||| |||||| | |||||||||||||||||||||| | | |||||| || |
Sbjct 1960258 GCGGGAGCGCCATCTTCTTCAGGTCCGCGGGGTTCCACGCGCTGAGTATGATGCGGCGGT 1960317
Query 21199 CGTGGGGCCGCCTGTTAATTAG---ATCCACCACGTAACGCAGCTGGTCCACCCCCTGAC 21255
| | | || |||| | || ||| | || | ||||||||| || ||||| |
Sbjct 1960318 CATATG---GCTTGTTCTTCAGCTTATCAATGACCTCCGCCAGCTGGTCGACGCCCTGGC 1960374
Query 21256 CCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGT 21315
| |||| | ||| ||| ||||||| || ||||| || | ||| ||||| || |
Sbjct 1960375 CGGTATAGTCTACATCGTGTCCCTTGTACTCGGCGCCAAAGTGCCGCCATTGGAAGCCAT 1960434
Query 21316 ACACCGGCCCCAGATCGCCCTC 21337
|||| ||||| |||||||| ||
Sbjct 1960435 ACACGGGCCCGAGATCGCCTTC 1960456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775681975280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |