Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq7 102 7e-17 >seq7 Length=2328918 Score = 102 bits (112), Expect = 7e-17 Identities = 327/502 (65%), Gaps = 49/502 (10%) Strand=Plus/Plus Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936 ||||| ||| |||||| | ||| |||| |||||| | | || | || ||| Sbjct 1959963 ATCTTTAGCGTCGGAAAGTCCCTCGGCTCCCTCTCCAGCTGGACCTTCAACGCGTCGACG 1960022 Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG-GTCAG--- 20992 |||| | ||| ||||| || || |||| || ||| ||| ||||||| || || Sbjct 1960023 TGGTCGACGTACACGTGCGCATCGCCCATCGTATGCGTAAAAG-TCCCGGGCGTGAGATC 1960081 Query 20993 GCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGAC 21052 || || ||||||| | || | || || || || ||||| |||||||| || ||||| Sbjct 1960082 GCACG---CGTGAGCCAGCATGTGGGTTAGCAGCGCATAGCTCGCGATGTTGAAGGGGAC 1960138 Query 21053 CCCGAGGCCCATGTCGGCGGACCTCTGGTACAG----CTG-GCAGGACAGCTCCC----- 21102 || || ||||||||| | || |||||| || ||| |||| || | | | Sbjct 1960139 GCCAAGCCCCATGTCGCAGCTCCGCTGGTAAAGGATACTGTGCAGCACGCCCCTCTTCCT 1960198 Query 21103 -------CCC-------------GA---GCCACGTAAAACTGACACAAA-ACGTGACAAG 21138 ||| || | |||||| || || | |||| | ||| |||| Sbjct 1960199 CTCCTCACCCTCTTTCGCCTGCGGAAACGACACGTAGAATTG-CGCAAACATGTGGCAAG 1960257 Query 21139 GAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGAT 21198 | ||||| |||||| | |||||||||||||||||||||| | | |||||| || | Sbjct 1960258 GCGGGAGCGCCATCTTCTTCAGGTCCGCGGGGTTCCACGCGCTGAGTATGATGCGGCGGT 1960317 Query 21199 CGTGGGGCCGCCTGTTAATTAG---ATCCACCACGTAACGCAGCTGGTCCACCCCCTGAC 21255 | | | || |||| | || ||| | || | ||||||||| || ||||| | Sbjct 1960318 CATATG---GCTTGTTCTTCAGCTTATCAATGACCTCCGCCAGCTGGTCGACGCCCTGGC 1960374 Query 21256 CCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGT 21315 | |||| | ||| ||| ||||||| || ||||| || | ||| ||||| || | Sbjct 1960375 CGGTATAGTCTACATCGTGTCCCTTGTACTCGGCGCCAAAGTGCCGCCATTGGAAGCCAT 1960434 Query 21316 ACACCGGCCCCAGATCGCCCTC 21337 |||| ||||| |||||||| || Sbjct 1960435 ACACGGGCCCGAGATCGCCTTC 1960456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775681975280