Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq8 93.3 4e-14
seq1 86.0 6e-12
>seq8
Length=2222996
Score = 93.3 bits (102), Expect = 4e-14
Identities = 155/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 52838 AGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCA 52897
||||||| | ||| || || ||||| | || ||||| | ||| | || | ||||
Sbjct 705397 AGGCCGTTGTCATCGAGAAGGAGTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCA 705338
Query 52898 TGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGC 52957
||||| | || | |||||| ||||||||||||| || || ||| | ||| | || |
Sbjct 705337 TGAACTCCACTCTTATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGCTC 705278
Query 52958 TCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGC 53017
|||| | | || ||| || ||| |||||||| || ||| | ||||| ||||
Sbjct 705277 TCGGCAACACCAAGGTCTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGC 705218
Query 53018 TCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
| | ||||| || ||||| ||||||| || || ||||| |||
Sbjct 705217 TTGCCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGATTAC 705174
>seq1
Length=5402283
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| || | ||| | || ||||| | || || || || |||||||| || |||
Sbjct 3267026 CCGCCACGGAGACGAAGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAA 3266967
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | |||||| | ||| || || || |||| ||||| |||||||| |||||
Sbjct 3266966 AGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGA 3266907
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716
|| || || ||||| ||| | || | || | | || | || |||| | ||| ||
Sbjct 3266906 ATACCCTCCTTGTCT-TGAATCTTGGACTTCACGTTGTCGATGGTATCGGATGACTCGAC 3266848
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | ||| | ||||||||||||||||| || || || || ||||||
Sbjct 3266847 TTCGAGGGTGATGGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCATA 3266799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063621751200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |