Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq4 190 3e-43
seq8 96.9 5e-15
>seq4
Length=3244807
Score = 190 bits (210), Expect = 3e-43
Identities = 481/719 (67%), Gaps = 12/719 (2%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|||||||| || || | ||||| | | ||||| ||| ||||| | || | |
Sbjct 1908441 TCGAACTCCTCACCGTAGACATCTGCGAGACCAGGGGCCTCGCTGGGACAAAACAGAGTC 1908500
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979
||||| |||| || | || || ||||| || || || || | ||||||||| ||| ||
Sbjct 1908501 CACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGC-ATAGAA 1908559
Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039
|| || | | | |||||| || || |||||| | || ||||| || |
Sbjct 1908560 CAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAA-GCTAA 1908618
Query 80040 A-ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTC 80098
| | || | |||||||| |||| ||| ||||| | | ||||| || ||||| || |
Sbjct 1908619 ACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCAC 1908678
Query 80099 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 80158
|||| || | ||| ||||| ||||| || || || | | ||| ||||| | ||| ||||
Sbjct 1908679 CCTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGG 1908738
Query 80159 ATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAG 80216
| ||||| ||||| || ||| || || |||||||||| | | | || | |
Sbjct 1908739 AGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCA--G 1908796
Query 80217 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTATCATAGATGC 80275
||| || || || || | || ||||| | ||||| ||| || ||||| || ||||| |
Sbjct 1908797 ACCAATACCGCCAGCAGTCTTGGAGATCATGGCGCA-CGTCTTCAACGTGTCGTAGATAC 1908855
Query 80276 CCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA- 80334
|||| ||||| || || |||||| | || || || |||||||| || |||
Sbjct 1908856 CCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGA-GACGGT 1908914
Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394
|| |||||||| || | || || ||||||||||| || | || | |||| | | |
Sbjct 1908915 GTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCG 1908974
Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454
|| ||||| ||||| || |||||| || || || || || |||||||| | |
Sbjct 1908975 TAGGTCTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGC 1909034
Query 80455 ATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAA 80514
|||||||| || | || | | |||| ||| || | | ||| ||| ||||
Sbjct 1909035 ATGTGCTGTGGACGCTCGGCTACCTTGCCATTGATGCGGAGAAGGTATGATCGCTCCAGG 1909094
Query 80515 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573
|| || || ||||| | | ||| ||||| || ||||| | |||| ||||||||||
Sbjct 1909095 GTCTTGAACCCAAAGAATTGGTAGTTGAAGTCGCGGTCGTATACAATAGCCGAGTTGAG 1909153
>seq8
Length=2222996
Score = 96.9 bits (106), Expect = 5e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| ||||| || ||||| |||||||| | | || || |||||||| || || ||
Sbjct 705460 CAGGCGAAGTCAGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGA 705519
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| ||||| ||||||||||| || ||||| || ||||||||||| || || ||||||
Sbjct 705520 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCGCTGAAGAAG 705579
Query 50080 ATTCCTTCTACTGCGGCAAAGGC 50102
|| || || || ||||| || ||
Sbjct 705580 ATACCCTCGACGGCGGCGAATGC 705602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268252320040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |