Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq4 176 6e-39
>seq4
Length=3244807
Score = 176 bits (194), Expect = 6e-39
Identities = 451/674 (67%), Gaps = 12/674 (2%)
Strand=Plus/Plus
Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048
||||| | || | |||||| |||| || | || || ||||| || || || || | |
Sbjct 1908486 GGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACC 1908545
Query 72049 CAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 72107
|||||||| ||| || || || | | | |||||| || || |||||| |
Sbjct 1908546 CAAAGAGC-ATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAA 1908604
Query 72108 ATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCG 72166
|| ||||| || | | | || | |||||||| |||| ||| ||||| | | ||||
Sbjct 1908605 GTCAAGGAA-GCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCG 1908663
Query 72167 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 72226
| || ||||| || ||||| || | ||| ||||| ||||| || || || | | ||| |
Sbjct 1908664 GACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAG 1908723
Query 72227 GAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT-- 72284
|||| | ||| ||||| | ||| ||||| || ||| || || ||||||||||
Sbjct 1908724 GAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGC 1908783
Query 72285 ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-A 72343
| ||| || | |||| || || || || | || ||||| | ||||| ||| || |
Sbjct 1908784 AGTGCACGTTCA--GACCAATACCGCCAGCAGTCTTGGAGATCATGGCGCA-CGTCTTCA 1908840
Query 72344 ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACA 72403
|||| || ||||| ||||| || || || ||| |||||| | || || || ||||
Sbjct 1908841 ACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACA 1908900
Query 72404 TTTGGTGACGACTA-GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 72462
|||| || ||| || |||||||| || | || || ||||||||||| || | ||
Sbjct 1908901 TTTGAGGA-GACGGTGTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTC 1908959
Query 72463 TCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACC 72522
| |||| | | ||| ||||| ||||| || |||||| || || || ||
Sbjct 1908960 TGCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACA 1909019
Query 72523 GCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAG 72582
|| |||||||| | ||| ||||| || | || | | |||| ||| || | | |
Sbjct 1909020 GCTACACGCATCAGCATGTGCTGTGGACGCTCGGCTACCTTGCCATTGATGCGGAGAAGG 1909079
Query 72583 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATA 72642
|| ||| |||| || || || ||||| | | ||| ||||| || ||||| | |
Sbjct 1909080 TATGATCGCTCCAGGGTCTTGAACCCAAAGAATTGGTAGTTGAAGTCGCGGTCGTATACA 1909139
Query 72643 ATAACCGAATTGAG 72656
||| |||| |||||
Sbjct 1909140 ATAGCCGAGTTGAG 1909153
Score = 93.3 bits (102), Expect = 6e-14
Identities = 303/470 (64%), Gaps = 3/470 (1%)
Strand=Plus/Plus
Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848
|||| ||| | || ||||| || |||| || || || | || ||||| |||||||
Sbjct 1907277 TCCTGGTCTACAGTGAACTGGATAGGAGCAGAGGCAGCCATGGTTCGTAGGTAGTACAAT 1907336
Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908
|| || || || || || |||| ||| ||| ||||| ||| | ||| | ||
Sbjct 1907337 CCAGTCTTCAGCCCAAGCTTCCAACCGGCAAAGTGCATGGACGTGATCTTGCCCATGGTA 1907396
Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968
|| || || ||||| |||| ||||||| |||||||||||||| || | ||| ||
Sbjct 1907397 GGCTCCTTCATATGAATGTTCAGCGACTGAGACTGATCGATGAAGGCACCACGGTCAGCG 1907456
Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028
| ||| | ||||| | || | |||||||||| || || || | ||| ||
Sbjct 1907457 GACATCTGAATGATGTTACGCTGCGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATC 1907516
Query 71029 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085
|| || |||| ||| | | ||| ||||| |||||||| || || || | || ||
Sbjct 1907517 TCATCGGGAATGTTGGGGATGCGCTGGATGGAACCACCATCGGCGATGATTCGGTTCTTC 1907576
Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145
|| | || ||| | | ||| | | | | || | ||| || || ||
Sbjct 1907577 ATGTTGTCTGACCAGAGGCCCATGTCGACAAGATCCTTGAGCAACCAAGGGTTGACGACC 1907636
Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205
|| || || |||| ||| || | ||||| ||| || || || || || || | ||
Sbjct 1907637 TGGAACTCACCAGCCAACACGCGACGAGAGTAGATGTTGGAAGTGTAGGGCTCGAAGCAC 1907696
Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 71255
|| || | || | || || | ||| || || |||||||| ||||||||
Sbjct 1907697 TCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCAC 1907746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138688256360
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