Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq4 170 3e-37
seq8 159 5e-34
>seq4
Length=3244807
Score = 170 bits (188), Expect = 3e-37
Identities = 351/517 (68%), Gaps = 4/517 (1%)
Strand=Plus/Minus
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|||||| ||||| ||||| || || || || || | ||| ||||| |||| || |||
Sbjct 1908691 TACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTGGAGCCGTGG 1908632
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||||| ||||| ||| ||| | || |||| || ||| ||| || |||| |||
Sbjct 1908631 CACGCAGACGTGTTTAGCTTCCTTGACTTGCGAAAGAACCACGGCAAGGAGGAGGTACGT 1908572
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
|| | ||| |||| ||||| || ||||| || || ||||||||||||| ||| | ||
Sbjct 1908571 GCGCGTGACCTGTTCTATGCTCTTTGGGTACCGGACCTGTTCATGAAGCGTGTCCAAGAG 1908512
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
|||| | |||| || | || ||| | | | || ||||| | ||| || ||
Sbjct 1908511 AATGGCGAGTGGACTCTGTTTTGTCCCAGCGAGGCCCCTGGTCTCGCAGATGTCTACGGT 1908452
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGT 97165
|| ||||| ||||| |||| | ||||| |||||||| ||||||||| | |
Sbjct 1908451 GAGGAGTTCGAGGCTCTGTACGCCAGGTACGAAGCTGAGGGCCGTGGACGTGAGACCA-T 1908393
Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
| ||| | |||| |||||| | || ||| | ||||||| ||||| |||| || |
Sbjct 1908392 CCGTGC-CCAGAAGCTGTGGTATGCTATCCTCGAGGCTCAGACTGAGACCGGAAACCCCT 1908334
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284
|||| ||||||||||| | || ||||| || ||||| || | || || |||
Sbjct 1908333 ACATGCTCTACAAGGACGCTTGCAACCGCAAGAGTAACCAGAAGAACCTCGGAACTATCC 1908274
Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344
||||||| || ||||| || || | |||||| || | || |||||| || || |
Sbjct 1908273 GCAGCTCCAACCTCTGCACTGAGATCATCGAGTACACCGCCCCTGACGAGGTCGCCGTAT 1908214
Query 97345 GCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381
|| ||| || || || || || | |||||| ||
Sbjct 1908213 GCAATCTTGCCTCTCTCGCCCTCCCTAGGTTTGTCGA 1908177
>seq8
Length=2222996
Score = 159 bits (176), Expect = 5e-34
Identities = 581/913 (64%), Gaps = 85/913 (9%)
Strand=Plus/Minus
Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081
||| |||||||||| ||||| | || ||||| ||||| | ||| ||| |||||||||||
Sbjct 706065 TGGCAAATGTACAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATCGATCTGTCC 706006
Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141
||||| ||| |||| ||| | | || | | ||| ||||| || || || |||
Sbjct 706005 AAGGATCTGCACGACTGGAACAAGCGCCTCAATGACGACGAGCGCTTCTTCATCTCACAC 705946
Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTC 125201
| | |||||||| || | || || || ||||||||||| || || | ||||||
Sbjct 705945 GTCCTTGCCTTCTTCGCTGCATCGGACGGTATCGTCAACGAGAACTTGGTCGAGCGATTC 705886
Query 125202 TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAG 125261
|||| | || || |||| | ||||| ||||| ||||| |||||||| |||
Sbjct 705885 AGCGGAGAGGTTCAGATCCCCGAGGCGCGATGCTTCTACGGCTTCCAGATCATGATGGAG 705826
Query 125262 AACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCAA 125318
||| | ||||| || | ||||| |||| |||| ||||| |||| || |||
Sbjct 705825 AACATCCACTCCGAGACATACTCCCTCTTGATCGACACATACATCAGCGAGCCTAAGCAG 705766
Query 125319 CGTAAACACATGCTCTTTAACGCAATCGAC-ACGGT----------GC------------ 125355
|| | | || || || ||||| || ||| || || ||
Sbjct 705765 CGCACATAC---CTGTTCAACGCCATTGACAACAGTAAGTTACTTGGCACTCATACCCCG 705709
Query 125356 -----CGTCTATA---CGT---------------------AAAAAGGCTCAATGGGTGAT 125386
||| | || ||| || ||||| | |||| |
Sbjct 705708 CGACGCGTATCTAACGCGTGTCACAGTTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCT 705649
Query 125387 TCGGTGGATCGATGACGACAAGTCTTCGTACGCCGAC-AGACTGGTGGCATTCGCCGCCG 125445
|| |||||| |||| | || || | | || |||| | || | |||||||||||||
Sbjct 705648 GCGATGGATCTCTGACAAGAACTCCACCTTCG-CGACGCGTCTCATCGCATTCGCCGCCG 705590
Query 125446 TAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGAC 125505
| ||||| |||||||| || |||||| ||||||| |||||||||||||| || |
Sbjct 705589 TCGAGGGTATCTTCTTCAGCGGCTCCTTTGCGTCCATCTTCTGGCTCAAGAAGCGTGGCC 705530
Query 125506 TCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTG 125565
||||||| || || || | |||||| | || ||||| ||||||||| | ||| ||
Sbjct 705529 TCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACACTG 705470
Query 125566 ACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGC--GATGA 125623
|||| ||| || || | ||| | ||| | ||| || | || |
Sbjct 705469 ACTTCGCCTGCCTCCTCT----------TCTCCCTCC----TCAAGACCCGCCCTGACAA 705424
Query 125624 AAAGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGA 125680
||| || || | || | ||| | ||||| || || | ||||| || || ||
Sbjct 705423 GAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCATCGAGAAGGAGTTCCTCACTGA 705364
Query 125681 ATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTT 125740
| || || | | || | |||||||||| || || |||||| ||||||| |||||
Sbjct 705363 CGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCACTCTTATGTGCCAGTACATCGAGTT 705304
Query 125741 TGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTTACAACGCCAAGAA 125797
|| || || || || || | | | || | |||| | |||||||| | ||
Sbjct 705303 CGTCGCCGACCGCCTGCT---CCTGGCTCTCGGCAACACCAAGGTCTACAACGCGACCAA 705247
Query 125798 TCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAA 125857
||||| || |||||| | ||| || || | || ||||||||||| |||||||||
Sbjct 705246 CCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCAACTTCTTCGAGAAGCG 705187
Query 125858 GGTCAGCGAGTAC 125870
||| |||| |||
Sbjct 705186 CGTCGGCGATTAC 705174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058634942360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |