Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4 170 3e-37 seq8 159 5e-34 >seq4 Length=3244807 Score = 170 bits (188), Expect = 3e-37 Identities = 351/517 (68%), Gaps = 4/517 (1%) Strand=Plus/Minus Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 |||||| ||||| ||||| || || || || || | ||| ||||| |||| || ||| Sbjct 1908691 TACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTGGAGCCGTGG 1908632 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| ||||| ||| ||| | || |||| || ||| ||| || |||| ||| Sbjct 1908631 CACGCAGACGTGTTTAGCTTCCTTGACTTGCGAAAGAACCACGGCAAGGAGGAGGTACGT 1908572 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 || | ||| |||| ||||| || ||||| || || ||||||||||||| ||| | || Sbjct 1908571 GCGCGTGACCTGTTCTATGCTCTTTGGGTACCGGACCTGTTCATGAAGCGTGTCCAAGAG 1908512 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 |||| | |||| || | || ||| | | | || ||||| | ||| || || Sbjct 1908511 AATGGCGAGTGGACTCTGTTTTGTCCCAGCGAGGCCCCTGGTCTCGCAGATGTCTACGGT 1908452 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGT 97165 || ||||| ||||| |||| | ||||| |||||||| ||||||||| | | Sbjct 1908451 GAGGAGTTCGAGGCTCTGTACGCCAGGTACGAAGCTGAGGGCCGTGGACGTGAGACCA-T 1908393 Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 | ||| | |||| |||||| | || ||| | ||||||| ||||| |||| || | Sbjct 1908392 CCGTGC-CCAGAAGCTGTGGTATGCTATCCTCGAGGCTCAGACTGAGACCGGAAACCCCT 1908334 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284 |||| ||||||||||| | || ||||| || ||||| || | || || ||| Sbjct 1908333 ACATGCTCTACAAGGACGCTTGCAACCGCAAGAGTAACCAGAAGAACCTCGGAACTATCC 1908274 Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344 ||||||| || ||||| || || | |||||| || | || |||||| || || | Sbjct 1908273 GCAGCTCCAACCTCTGCACTGAGATCATCGAGTACACCGCCCCTGACGAGGTCGCCGTAT 1908214 Query 97345 GCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 || ||| || || || || || | |||||| || Sbjct 1908213 GCAATCTTGCCTCTCTCGCCCTCCCTAGGTTTGTCGA 1908177 >seq8 Length=2222996 Score = 159 bits (176), Expect = 5e-34 Identities = 581/913 (64%), Gaps = 85/913 (9%) Strand=Plus/Minus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| |||||||||| ||||| | || ||||| ||||| | ||| ||| ||||||||||| Sbjct 706065 TGGCAAATGTACAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATCGATCTGTCC 706006 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 ||||| ||| |||| ||| | | || | | ||| ||||| || || || ||| Sbjct 706005 AAGGATCTGCACGACTGGAACAAGCGCCTCAATGACGACGAGCGCTTCTTCATCTCACAC 705946 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTC 125201 | | |||||||| || | || || || ||||||||||| || || | |||||| Sbjct 705945 GTCCTTGCCTTCTTCGCTGCATCGGACGGTATCGTCAACGAGAACTTGGTCGAGCGATTC 705886 Query 125202 TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAG 125261 |||| | || || |||| | ||||| ||||| ||||| |||||||| ||| Sbjct 705885 AGCGGAGAGGTTCAGATCCCCGAGGCGCGATGCTTCTACGGCTTCCAGATCATGATGGAG 705826 Query 125262 AACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCAA 125318 ||| | ||||| || | ||||| |||| |||| ||||| |||| || ||| Sbjct 705825 AACATCCACTCCGAGACATACTCCCTCTTGATCGACACATACATCAGCGAGCCTAAGCAG 705766 Query 125319 CGTAAACACATGCTCTTTAACGCAATCGAC-ACGGT----------GC------------ 125355 || | | || || || ||||| || ||| || || || Sbjct 705765 CGCACATAC---CTGTTCAACGCCATTGACAACAGTAAGTTACTTGGCACTCATACCCCG 705709 Query 125356 -----CGTCTATA---CGT---------------------AAAAAGGCTCAATGGGTGAT 125386 ||| | || ||| || ||||| | |||| | Sbjct 705708 CGACGCGTATCTAACGCGTGTCACAGTTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCT 705649 Query 125387 TCGGTGGATCGATGACGACAAGTCTTCGTACGCCGAC-AGACTGGTGGCATTCGCCGCCG 125445 || |||||| |||| | || || | | || |||| | || | ||||||||||||| Sbjct 705648 GCGATGGATCTCTGACAAGAACTCCACCTTCG-CGACGCGTCTCATCGCATTCGCCGCCG 705590 Query 125446 TAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGAC 125505 | ||||| |||||||| || |||||| ||||||| |||||||||||||| || | Sbjct 705589 TCGAGGGTATCTTCTTCAGCGGCTCCTTTGCGTCCATCTTCTGGCTCAAGAAGCGTGGCC 705530 Query 125506 TCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTG 125565 ||||||| || || || | |||||| | || ||||| ||||||||| | ||| || Sbjct 705529 TCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACACTG 705470 Query 125566 ACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGC--GATGA 125623 |||| ||| || || | ||| | ||| | ||| || | || | Sbjct 705469 ACTTCGCCTGCCTCCTCT----------TCTCCCTCC----TCAAGACCCGCCCTGACAA 705424 Query 125624 AAAGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGA 125680 ||| || || | || | ||| | ||||| || || | ||||| || || || Sbjct 705423 GAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCATCGAGAAGGAGTTCCTCACTGA 705364 Query 125681 ATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTT 125740 | || || | | || | |||||||||| || || |||||| ||||||| ||||| Sbjct 705363 CGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCACTCTTATGTGCCAGTACATCGAGTT 705304 Query 125741 TGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTTACAACGCCAAGAA 125797 || || || || || || | | | || | |||| | |||||||| | || Sbjct 705303 CGTCGCCGACCGCCTGCT---CCTGGCTCTCGGCAACACCAAGGTCTACAACGCGACCAA 705247 Query 125798 TCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAA 125857 ||||| || |||||| | ||| || || | || ||||||||||| ||||||||| Sbjct 705246 CCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCAACTTCTTCGAGAAGCG 705187 Query 125858 GGTCAGCGAGTAC 125870 ||| |||| ||| Sbjct 705186 CGTCGGCGATTAC 705174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058634942360