Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 1e-11 >seq7 Length=2328918 Score = 84.2 bits (92), Expect = 1e-11 Identities = 145/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 25363 CCACCCTCCTGTT-TATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTC 25421 ||| |||||| | |||| | || || |||||| || ||||||||||| ||||| | Sbjct 1959948 CCAACCTCCTTATGTATCTTTAGCGTCGGAAAGTCCCTCGGCTCCCTCTCCAGCTGGACC 1960007 Query 25422 TTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTG-GACAAACTC 25480 |||| || || ||||| || | ||| ||||| || || |||| || || | ||| || Sbjct 1960008 TTCAACGCGTCGACGTGGTCGACGTACACGTGCGCATCGCCCATCGTATGCGTAAAAGTC 1960067 Query 25481 TCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGAT 25540 || || || || ||| ||||| ||||| || || || ||||| ||||| Sbjct 1960068 -CCGGGCGTGAGATCGCACGCGTGAGCCAGCATGTGGGTTAGCAGCGCATAGCTCGCGAT 1960126 Query 25541 GTTAAAGGGTACCCCGAACCCCATGTC 25567 ||| ||||| || || | ||||||||| Sbjct 1960127 GTTGAAGGGGACGCCAAGCCCCATGTC 1960153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137347128953