Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=5402283 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || |||||||| || | ||| || ||| | || | || || Sbjct 3267009 CACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCTTC 3266950 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || ||| || || | ||||| | | |||||||| ||||||||||| || ||||| | Sbjct 3266949 CAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCTTG 3266890 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || | ||| ||| | ||| || || | ||||| || | |||||||| || Sbjct 3266889 AATCTTGGACTTCACGTTGTCGATGGTATCGGATGACTCGACTTCGAGGGTGATGGTCTT 3266830 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | || || |||||||||||||| Sbjct 3266829 GCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290858177960