Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 188 1e-43 seq8 109 9e-20 >seq1 Length=5402283 Score = 188 bits (208), Expect = 1e-43 Identities = 181/231 (78%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| |||||| || |||||||| || ||||||||||| |||||||| ||||| ||||| Sbjct 288533 AGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCTGCTATCCGCCGTCTTGCTCGC 288475 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 |||||||| ||||||||| |||| | || |||| || |||| |||| ||| | ||| Sbjct 288474 CGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGACCCGTGGTGTCCTCAAG 288415 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 | ||||||| || | || |||| ||| ||| || ||| || |||||||| || || ||| Sbjct 288414 ACCTTCCTCGAGTCGGTCATCCGTGACGCTGTCACCTACACTGAGCACGCCAAGCGAAAG 288355 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAG 16678 ||||||||||| | ||| | ||||| || | || || |||||||||||| Sbjct 288354 ACTGTCACCTCTCTCGATGTTGTCTACGCGCTCAAGCGACAAGGCCGTAAG 288304 >seq8 Length=2222996 Score = 109 bits (120), Expect = 9e-20 Identities = 212/326 (65%), Gaps = 53/326 (16%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || ||||||||||| || || Sbjct 606939 GCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCCAT 606997 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC--------------------- 16530 ||| ||||| || ||||||||||| ||||||||| |||| Sbjct 606998 CCGCCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCAGCCAGTATGCATCCTCACCT 607057 Query 16531 ------------------------------TGGATTGGTCTATGAAGAGATTCGTGATGT 16560 || | || |||| || |||| |||| ||| Sbjct 607058 AACCACAAAGCCATCACGTCGCTAACCATCTGCAGTGATCTACGAGGAGACCCGTGGTGT 607117 Query 16561 TTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAA 16620 | | |||| ||||| ||| ||| |||| |||||| || ||| ||||||||||| || Sbjct 607118 TCTCAAGACTTTCCTTGAGAGCGTCATCCGCGATGCTGTCACCTACACCGAGCACGCCAA 607177 Query 16621 ACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGAT 16680 || ||||| ||||||||| | || | ||||| || | || || || ||||||| | Sbjct 607178 GCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCTCTCAAGCGCCAGGGCCGTACCCT 607237 Query 16681 TTATGGTTTTGGAAGTTAATCTTCTA 16706 || ||||| || ||||| | |||| Sbjct 607238 CTACGGTTTCGGTGGTTAAGCGTCTA 607263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075144227273