Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 188 1e-43
seq8 109 9e-20
>seq1
Length=5402283
Score = 188 bits (208), Expect = 1e-43
Identities = 181/231 (78%), Gaps = 1/231 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| |||||| || |||||||| || ||||||||||| |||||||| ||||| |||||
Sbjct 288533 AGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCTGCTATCCGCCGTCTTGCTCGC 288475
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
|||||||| ||||||||| |||| | || |||| || |||| |||| ||| | |||
Sbjct 288474 CGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGACCCGTGGTGTCCTCAAG 288415
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| ||||||| || | || |||| ||| ||| || ||| || |||||||| || || |||
Sbjct 288414 ACCTTCCTCGAGTCGGTCATCCGTGACGCTGTCACCTACACTGAGCACGCCAAGCGAAAG 288355
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAG 16678
||||||||||| | ||| | ||||| || | || || ||||||||||||
Sbjct 288354 ACTGTCACCTCTCTCGATGTTGTCTACGCGCTCAAGCGACAAGGCCGTAAG 288304
>seq8
Length=2222996
Score = 109 bits (120), Expect = 9e-20
Identities = 212/326 (65%), Gaps = 53/326 (16%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 606939 GCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCCAT 606997
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC--------------------- 16530
||| ||||| || ||||||||||| ||||||||| ||||
Sbjct 606998 CCGCCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCAGCCAGTATGCATCCTCACCT 607057
Query 16531 ------------------------------TGGATTGGTCTATGAAGAGATTCGTGATGT 16560
|| | || |||| || |||| |||| |||
Sbjct 607058 AACCACAAAGCCATCACGTCGCTAACCATCTGCAGTGATCTACGAGGAGACCCGTGGTGT 607117
Query 16561 TTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAA 16620
| | |||| ||||| ||| ||| |||| |||||| || ||| ||||||||||| ||
Sbjct 607118 TCTCAAGACTTTCCTTGAGAGCGTCATCCGCGATGCTGTCACCTACACCGAGCACGCCAA 607177
Query 16621 ACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGAT 16680
|| ||||| ||||||||| | || | ||||| || | || || || ||||||| |
Sbjct 607178 GCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCTCTCAAGCGCCAGGGCCGTACCCT 607237
Query 16681 TTATGGTTTTGGAAGTTAATCTTCTA 16706
|| ||||| || ||||| | ||||
Sbjct 607238 CTACGGTTTCGGTGGTTAAGCGTCTA 607263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075144227273
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |