Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq4 167 3e-36
seq8 84.2 3e-11
>seq4
Length=3244807
Score = 167 bits (184), Expect = 3e-36
Identities = 449/674 (67%), Gaps = 12/674 (2%)
Strand=Plus/Plus
Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242
||||| | || | |||||| || | || | || || ||||| || || || || | |
Sbjct 1908486 GGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACC 1908545
Query 63243 CAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63301
|||||||| ||| || || || | | | ||||| || || |||||| |
Sbjct 1908546 CAAAGAGC-ATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAA 1908604
Query 63302 ATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAG 63360
|| ||||| || | | | || | |||||||| |||| ||| ||||| | | || |
Sbjct 1908605 GTCAAGGAA-GCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCG 1908663
Query 63361 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 63420
| || ||||| || ||||| || | ||| ||||| ||||| || || || | | ||| |
Sbjct 1908664 GACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAG 1908723
Query 63421 GAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT-- 63478
|||| | |||||| || |||| ||||| || ||| || || ||||||||||
Sbjct 1908724 GAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGC 1908783
Query 63479 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-A 63537
| | | || | |||| || || || || | || ||||| | ||||| ||| || |
Sbjct 1908784 AGTGCACGTTCA--GACCAATACCGCCAGCAGTCTTGGAGATCATGGCGCA-CGTCTTCA 1908840
Query 63538 ACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACA 63597
||||||| ||||||||||| ||||| || || |||||| | || || || ||||
Sbjct 1908841 ACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACA 1908900
Query 63598 TTTGGTGACGAC-TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 63656
|||| || ||| || |||||||| || | || || ||||||||||| || | ||
Sbjct 1908901 TTTGAGGA-GACGGTGTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTC 1908959
Query 63657 TCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACT 63716
| || | | | ||| ||||| ||||| || |||||| || || || ||
Sbjct 1908960 TGCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACA 1909019
Query 63717 GCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAG 63776
|| |||||||| | ||||||||| || | || | | |||| || || | | |
Sbjct 1909020 GCTACACGCATCAGCATGTGCTGTGGACGCTCGGCTACCTTGCCATTGATGCGGAGAAGG 1909079
Query 63777 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATA 63836
|| ||| |||| || || || ||||| | | ||| ||||| || ||||| | |
Sbjct 1909080 TATGATCGCTCCAGGGTCTTGAACCCAAAGAATTGGTAGTTGAAGTCGCGGTCGTATACA 1909139
Query 63837 ATAACCGAGTTGAG 63850
||| ||||||||||
Sbjct 1909140 ATAGCCGAGTTGAG 1909153
>seq8
Length=2222996
Score = 84.2 bits (92), Expect = 3e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| ||||| || ||||| |||||||| | | || || |||||||| || || ||
Sbjct 705460 CAGGCGAAGTCAGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGA 705519
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| ||||| ||||||||||| || ||||| || ||||| || || || || ||||||
Sbjct 705520 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCGCTGAAGAAG 705579
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAG 33452
|| || || || || || || || || ||
Sbjct 705580 ATACCCTCGACGGCGGCGAATGCGATGAG 705608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946725002760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |