Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 416 7e-111 >seq4 Length=3244807 Score = 416 bits (460), Expect = 7e-111 Identities = 1177/1784 (66%), Gaps = 48/1784 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| |||| | |||||||| | | | || || || || Sbjct 1909099 AAGACCCTGGAGCGATCATACCT-TCTCCGCATCAATGGCAAGGTAGCCGAGCGTCCACA 1909041 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGA 363518 ||| ||| | |||||||| ||| | || ||||| || |||| |||| || || || Sbjct 1909040 GCACATGCTGATGCGTGTAGCTGTGGGCATCCACGGCGAGGATATTGAGAAGGCTATCGA 1908981 Query 363519 AACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576 || || | | | || || || ||||||||||| |||||||| | | |||| Sbjct 1908980 GACCTACGACATGAT--GTCGCAGAAGTTCTTCACGCACGCTTCGCCAACACTTTTCAAT 1908923 Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636 || || || | ||| || ||||| |||||||| || | | |||||||| || | Sbjct 1908922 GCGGGTACACCGTCTCCTCAAATGTCGTCTTGCTTCCTGATCGACATGAAGGAAGACAGC 1908863 Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696 ||||||||||||| ||||| | |||| || || | || ||||||| ||| ||||| Sbjct 1908862 ATCGAGGGTATCTACGACACGTTGAAGACGTGCGCCATGATCTCCAAGACTGCTGGCGGT 1908803 Query 363697 ATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGG 363754 |||||| | | || | ||| ||||||| || | | ||||| | || || | Sbjct 1908802 ATTGGTCTGAACG-TGCACTGCATTCGTGCCACCGG-CTCATACATCGGAGGAACCAACG 1908745 Query 363755 GATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCG 363814 | ||| || || || |||| ||||||||||| | |||| ||||| |||||||| | Sbjct 1908744 GTACCTCCAACGGTCTCATTCCTATGCTTCGTGTCTACAACAACACTGCTAGGTACGTTG 1908685 Query 363815 ACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCG 363874 |||||||||| ||||| || || || || || || || ||||| || || | Sbjct 1908684 ACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTGGAGCCGTGGCACGCAG 1908625 Query 363875 ATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTG 363934 | | ||| || ||||| | || || ||| || || ||||| | ||||| |||| Sbjct 1908624 ACGTGTTTAGCTTCCTTGACTTGCGAAAGAACCACGGCAAGGAGGAGGTACGTGCGCGTG 1908565 Query 363935 ATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG---GAGGCAGGTA 363991 | ||||||||||| |||||||| | |||| || |||||||| || ||| || Sbjct 1908564 ACCTGTTCTATGCTCTTTGGGTACCGGACCTGTTCATGAAGCGTGTCCAAGAGAATGGCG 1908505 Query 363992 AGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACG 364051 || ||| | || ||||| || ||| || ||||| | ||||| | ||||| | Sbjct 1908504 AG---TGGACTCTGTTTTGTCCCAGCGAGGCCCCTGGTCTCGCAGATGTCTACGGTGAGG 1908448 Query 364052 ACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCG 364111 | | | ||||| |||| | ||| ||| | ||||| | ||| |||| || | | Sbjct 1908447 AGTTCGAGGCTCTGTACGCCAGGTACGAAGCTGAGGGCCGTGGACGTGAGACCATCCGTG 1908388 Query 364112 CACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGT 364171 | |||||||| |||| ||| ||| | || | |||| |||||| |||| ||||| ||| Sbjct 1908387 CCCAGAAGCTGTGGTATGCTATCCTCGAGGCTCAGACTGAGACCGGAAACCCCTACATGC 1908328 Query 364172 TGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG- 364230 | ||||| || | |||||||||||| |||||| || |||| || || | || |||| Sbjct 1908327 TCTACAAGGACGCTTGCAACCGCAAGAGTAACCAGAAGAACCTCGGAACTA-TCCGCAGC 1908269 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290 |||||| || || ||||| || || |||||||| || |||||| |||||||| || Sbjct 1908268 TCCAACCTCTGCACTGAGATCATCGAGTACACCGCCCCTGACGAGGTCGCCGTATGCAAT 1908209 Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGT-----AAAAG-ATGGTACTTTTGACCACCAG 364344 ||||| || |||| || || |||||| | ||| |||| |||||| |||| Sbjct 1908208 CTTGCCTCTCTCGCCCTCCCTAGGTTTGTCGACGAGAAGAATGGCGTGTTTGACTTCCAG 1908149 Query 364345 CATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAAT 364404 | ||| | || || || | || ||| |||| | ||||| | ||||| || Sbjct 1908148 AAGCTTCACGAAGTCACTCAGATTGTCACTCGCAACTTGAACAAGATCATCGAGGTCAAC 1908089 Query 364405 TATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGG 364463 | || || | || || || || | | || | | || || || | ||||| || Sbjct 1908088 CACTACCCCGTCCCGGAGGCTCGTAAGAGC-AACTTCAGGCACCGGCCCGTCGGTCTCGG 1908030 Query 364464 TGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGC 364523 |||||| || || ||||| || || || ||| | || || || || || || Sbjct 1908029 TGTACAAGGTCTTGCTGATACCTTCCTGTCTCTTCGTATGCCTTTCGAATCTCCCGAGGC 1907970 Query 364524 TCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTG 364583 | || || | |||||||||| || || || || || ||||| | || || Sbjct 1907969 TAAGAAACTCAACATCCAGATCTTTGAGACCATCTACCACGCAGCTTTGACTTCGTCCTG 1907910 Query 364584 TGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGG 364643 || |||| || ||| |||| || ||||| ||||| ||| |||| ||||| Sbjct 1907909 CGACCTGGCCAAGGAGCTCGGACCGTACGAGACATATGAAGGGTCTCCTGTTTCTCAGGG 1907850 Query 364644 AAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT 364703 | |||| | || | ||||| ||||| || | | | ||| |||||| || Sbjct 1907849 CATTCTCCAATACGACATGTGGAACGTCACCCCCACCGACTTGTGGGACTGGG---CG-- 1907795 Query 364704 ACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTC---CCTCGTTACAGCGCC 364754 || || | |||| |||| ||| |||||||| ||||| || || Sbjct 1907794 -TCTTTGAAGGAGAAGATTGCCCAGCACGGTGTCCGCAACTCTTTGCTCGT---GGCACC 1907739 Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814 |||||| || || |||||| | ||||||||||| |||||||||||||||| || | || Sbjct 1907738 CATGCCGACAGCCTCTACTTCGCAGATCCTCGGGTACAACGAGTGCTTCGAGCCCTACAC 1907679 Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874 ||| | || || || || || | | || || || | ||| || || | | Sbjct 1907678 TTCCAACATCTACTCTCGTCGCGTGTTGGCTGGTGAGTTCCAGGTCGTCAACCCTTGGTT 1907619 Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934 ||||||||||| |||| || || ||| |||| |||||||||| |||||||| Sbjct 1907618 GCTCAAGGATCTTGTCGACATGGGCCTCTGGTCAGACAACATGAAGAACCGAATCATCGC 1907559 Query 364935 CGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAA 364994 || | |||||| | ||| ||| || |||| || || | ||| | | ||||| Sbjct 1907558 CGATGGTGGTTCCATCCAGCGCATCCCCAACATTCCCGATGAGATCAAGGCCCTGTACAA 1907499 Query 364995 AACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTT 365054 ||||| |||||||| || ||| | ||||| | ||| | || || || ||||| || Sbjct 1907498 GACCGTTTGGGAAATCTCGCAGCGTAACATCATTCAGATGTCCGCTGACCGTGGTGCCTT 1907439 Query 365055 TATCTGTCAGAGCCAGTCGTTTAACGTATTC--ATGACTCAGCCAACCTCCGCCAAGCTT 365112 ||| |||| |||||| | ||| |||| |||| |||| ||| | |||| | Sbjct 1907438 CATCGATCAGTCTCAGTCGCTGAAC--ATTCATATGAAGGAGCCTACCATGGGCAAGATC 1907381 Query 365113 ACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || |||||||| || ||| ||||| || || ||||| || Sbjct 1907380 ACGTCCATGCACTTTGCCGGTTGGAAGCTTGGGCTGAAGACTGG 1907337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352581347702