Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4 228 8e-55
seq8 134 1e-26
seq1 132 5e-26
seq11 123 2e-23
seq7 102 8e-17
>seq4
Length=3244807
Score = 228 bits (252), Expect = 8e-55
Identities = 928/1440 (64%), Gaps = 23/1440 (2%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| ||||| || |||||||| ||||| | || | ||| || ||| ||||
Sbjct 1907628 TTGACGACCTGGAACTCACCAGCCAACACGCGACGAGAGTAGATGTTGGAAGTGTAGGGC 1907687
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| | || ||||| || | || | || || |||||| |||||
Sbjct 1907688 TCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCACG 1907747
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || || ||||| | ||||||| || | ||||| | | |||| |||||
Sbjct 1907748 AGCAAAGAGTTGCGGACACCGTGCTGGGCAATCTTCTCCTTCAAAGACGCCCAGTCCCAC 1907807
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
| || || | |||| |||||||||||| || | |||||||| | ||
Sbjct 1907808 AAGTCGGTGGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGAGAAACAGGAGAC 1907867
Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGT-TTTGGCGAGCTCGCAACTCGCCTCCAGAGC 145356
|||| | | | || || | || | | ||||| || ||||| || || |||
Sbjct 1907868 CCTTCATATG-TCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGACGAAGTCAAAGC 1907926
Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416
|| || || ||||| || || ||||||| | | || || ||| |
Sbjct 1907927 TGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTCGGGAGATTCGAA 1907986
Query 145417 CGGCATGCGCAGCAGTACA--AAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474
||||| || || || ||| || | ||| || || || |||| || | |||| ||||
Sbjct 1907987 AGGCATACGAAG-AG-ACAGGAAGGTATCAGCAAGACCTTGTACACCGAGACCGACGGGC 1908044
Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534
|| || | | ||||||| | | ||| | || || || | || ||||| ||
Sbjct 1908045 CGGTGCCTGAAGTTGCTCTTACGAGCCTCCGGGACGGGGTAGTGGTTGACCTCGATGATC 1908104
Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAAC-CG 145593
|| |||||||| || || | || || | | | | ||| | ||||||||| ||
Sbjct 1908105 TTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGGAAGTCAAACACG 1908164
Query 145594 AGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653
|| || || | ||| | ||| || ||||| || || | ||| || || ||
Sbjct 1908165 CCATTCTTC-TCGTCGACAAACCTAGGGAGGGCGAGAGAGGCAAGATTGCATACGGCGAC 1908223
Query 145654 CTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCC 145713
||| || | | || |||| | | |||||| | ||| | ||| | ||| |||||
Sbjct 1908224 CTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGGATAGTTCC 1908283
Query 145714 CAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCC 145773
|| || | ||| ||||| || | |||||| |||||||||||||||||||| || ||
Sbjct 1908284 GAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGTAGGGGTTTCC 1908343
Query 145774 AGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTG 145833
||||| ||| | ||| | |||| | || | ||| ||||| | || |
Sbjct 1908344 GGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAGCTTCTGGGCACGGATGGTCTCACG 1908403
Query 145834 GTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATC 145893
|||||||| ||||||| | ||| || |||| ||| | ||||||| |||
Sbjct 1908404 TCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCTCACCGTAGACATC 1908463
Query 145894 GGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCG 145953
| || || || || | ||||||| | ||| | ||| |||| || | | ||| ||
Sbjct 1908464 TGCGAGACCAGGGGCCTCGCTGGGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACG 1908523
Query 145954 CTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTC 146013
|| ||| |||| || || ||||| || || || | || ||| ||||| |||||
Sbjct 1908524 CTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAACAGGTCACGCGCACGTACCTCCTC 1908583
Query 146014 AGCACCCATGTTTCGCT-TCAAATTAAGCACACTATAGATGTCCGCGTGCCACGGTTCAA 146072
|| || ||| | ||| | ||| | ||| | | ||| ||||||||||| || |
Sbjct 1908584 -CTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACACGTCTGCGTGCCACGGCTCCA 1908642
Query 146073 TATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTACCA-TG 146128
|||| ||||| ||| || || |||||||||||||| |||| || || || ||
Sbjct 1908643 GGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGT-ACCTAGCAGTG 1908701
Query 146129 TTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTTTATT 146188
||||| |||| || | ||| || || ||| ||| ||||| || ||
Sbjct 1908702 TTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATG 1908761
Query 146189 CTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCCGTACTTGGA 146247
| |||| || || | ||| || || |||| || | |||||| || || ||||||
Sbjct 1908762 TATGAGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGCCAGCAGT-CTTGGA 1908820
Query 146248 TATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCGAAT 146304
|| |||||| ||| | | ||| |||||||| || || ||||| || |||| ||
Sbjct 1908821 GATCATGGCGCACGTCTTC-AACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTC--AT 1908877
Query 146305 GCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGG 146364
| ||| ||| ||||| || |||| || | ||| || ||||| ||| | || ||
Sbjct 1908878 GTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGTGTACCCGCATTGAAAAGTGTTGG 1908937
Query 146365 GCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCTTGAAT 146424
|||||||| || | || | |||||| || || |||||||| | | |||
Sbjct 1908938 CGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAAT 1908997
Query 146425 GTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGCCAC 146484
|| ||||| || ||||||| ||| || ||||| |||||||| || || ||||| || ||
Sbjct 1908998 ATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTGGACGCTCGGCTAC 1909057
>seq8
Length=2222996
Score = 134 bits (148), Expect = 1e-26
Identities = 258/371 (70%), Gaps = 21/371 (6%)
Strand=Plus/Minus
Query 46234 GGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCAT 46293
||| ||||||| || || || || ||||||||| || || || ||||||||| ||||
Sbjct 705533 GGCCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCAC 705474
Query 46294 ACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACACC 46353
|| ||||| || || ||| || | | | | | || ||| || || ||||
Sbjct 705473 ACTGACTTCGCCTGCCTCCTCTT---CTCCCTCCT-CAAGACCCGC-----CCTGACAAG 705423
Query 46354 GTGCT----GAGCATGT--TCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCC 46407
||| || || | ||| |||| || | ||| ||||||||||| | || | |
Sbjct 705422 AAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCATCGAGAAGGAGTTCCTCACTGAC 705363
Query 46408 GCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCA-ATGTGCGACTACATCGAGTT 46466
|| |||||| |||||||| ||||||||| | || || |||||| | |||||||||||
Sbjct 705362 GCGCTGCCCTGCGCCCTGCTCGGCATGAACTC-CACTCTTATGTGCCAGTACATCGAGTT 705304
Query 46467 TGTAGCGGACCGACTGCTCGTGCAGCT-TCACCAGC-CGAAGCATTTTCACGCGCGCAAT 46524
|| || ||||| |||||| || ||| || || | | ||| | ||||| |||
Sbjct 705303 CGTCGCCGACCGCCTGCTCCTG--GCTCTCGGCAACACCAAGGTCTACAACGCGACCAAC 705246
Query 46525 CCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGC 46584
|| || || || ||| | |||||||| || | ||||| || || || ||||| ||||||
Sbjct 705245 CCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGC 705186
Query 46585 GTCGGCGAGTA 46595
|||||||| ||
Sbjct 705185 GTCGGCGATTA 705175
>seq1
Length=5402283
Score = 132 bits (146), Expect = 5e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || |||| ||| ||||| || || | ||| |||||||| || || ||||| |||
Sbjct 3267255 GCCGCCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGA 3267196
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||| || | ||||||||||||| |||| | ||||||||||||||| ||
Sbjct 3267195 AAGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGG 3267136
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| ||| ||| | | || | || |||| ||||| |
Sbjct 3267135 AATGCCTTCCTTGTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCAC 3267076
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || |||||||| ||||| || ||||||||||||||
Sbjct 3267075 CTCCAGTGTGATCGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| ||||| || || | ||| || ||||| ||||||||||| |||
Sbjct 3267026 CCGCCACGGAGACGAAGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAA 3266967
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || | ||||||||||||| |||| | ||||||||| ||||||||
Sbjct 3266966 AGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGA 3266907
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||| | | || | ||||||| |||||||
Sbjct 3266906 ATACCCTCCTTGTCTTGAATCTTGGACTTCACGTTGTCGATGGTATCGGATGACTCGACT 3266847
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| | || || || || ||||||||
Sbjct 3266846 TCGAGGGTGATGGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||||| || || || | || | ||||| ||||| || |||||||||||
Sbjct 3266516 GCCACCGCGCAGGCGGAGGACGAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAATCAGA 3266457
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| |||||| ||||| ||||||||||| ||| |||| || || ||||||||||| ||
Sbjct 3266456 CAGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCCGGCGG 3266397
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 3266396 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 3266337
Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210
|| | ||| | ||| || |||||
Sbjct 3266336 CTCCAAGGTGATGGTCTTGCCGGT 3266313
Score = 111 bits (122), Expect = 1e-19
Identities = 115/151 (76%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || | ||| | || |||||||| ||||||||||| ||| |
Sbjct 3266798 CCACCACGGAGGCGCAGGACGAGATGGAGTGTAGACTCCTTCTGAATGTTGTAGTCGGAC 3266739
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| || |||||||||||||||||
Sbjct 3266738 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGAGGA 3266679
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGA 131158
|| || || || || ||| ||| |||||
Sbjct 3266678 ATACCCTCCTTATCCTGGATCTTCGACTTGA 3266648
>seq11
Length=1384065
Score = 123 bits (136), Expect = 2e-23
Identities = 112/140 (80%), Gaps = 1/140 (1%)
Strand=Plus/Plus
Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061
|||| ||| ||||||| ||| || || || || | |||||||||||| || ||||||||
Sbjct 1031206 ATGATGCCGCCGCGCAGACGAAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAG 1031265
Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121
||| | |||||| |||||| ||||||||||| ||| |||| | ||||||||||||
Sbjct 1031266 TCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 1031325
Query 131122 GGAGGGATTCCTTCTTTGTC 131141
|| ||||| ||||| |||||
Sbjct 1031326 GGCGGGATGCCTTCCTTGTC 1031345
>seq7
Length=2328918
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || || || || || | ||||||||||| || |||||||| |||
Sbjct 679315 CCACCACGCAGGCGGAGGACCAAGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAG 679374
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| |||||||| || ||| |||| | ||||||||||||||| ||
Sbjct 679375 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 679434
Query 131128 ATTCCTTCTTTGTC 131141
||||| || |||||
Sbjct 679435 ATTCCCTCCTTGTC 679448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012440090240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |