Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
>seq1
Length=5402283
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||| ||||| || ||||||||||||| | || | ||||
Sbjct 3267011 AGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCT 3266952
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
||||| || ||||| || | || || ||||| || ||| ||| | ||||| |||||
Sbjct 3266951 TCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCT 3266892
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||| | |||||| | | | | || ||| | ||| ||| | |||||||||
Sbjct 3266891 TGAATCTTGGACTTCACGTTGTCGATGGTATCGGATGACTCGACTTCGAGGGTGATGGTC 3266832
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||||| ||| |||||||| ||||||||
Sbjct 3266831 TTGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| || |||||||| || || |||||||||| | || | ||||
Sbjct 3267239 AGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGCGTACGGCCGTCT 3267180
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
||||| || ||||| || | || || ||||| |||||| || | ||| || |||||
Sbjct 3267179 TCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCC 3267120
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | |||||| | | | |||||| | |||| |||| ||||| ||
Sbjct 3267119 TGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAGTGTGATCGTC 3267060
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| || || ||||| |||||||||||
Sbjct 3267059 TTACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087698842390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |