Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 7e-11 >seq1 Length=5402283 Score = 82.4 bits (90), Expect = 7e-11 Identities = 125/178 (70%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTG 25092 |||| || ||||||| || ||||||||||| || || | ||| || ||| | Sbjct 3266606 CCATTACGCTCGAAGTTGAATCGTCTGACACGATTGACAACGTCAAGTCGAAGATCCAGG 3266665 Query 25093 ACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAG 25152 | || || || ||||| || ||||| ||||| | || || |||||||| || | || | Sbjct 3266666 ATAAGGAGGGTATTCCTCCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTTGAGG 3266725 Query 25153 ATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| |||||| || ||| ||||| ||||| || || || || || ||| | || || Sbjct 3266726 ATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCTACACTCCATCTCGTCCT 3266783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327677847715