Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq8 116 8e-21
seq11 84.2 4e-11
>seq8
Length=2222996
Score = 116 bits (128), Expect = 8e-21
Identities = 269/400 (67%), Gaps = 4/400 (1%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| ||||||||||||||||||||| ||
Sbjct 705193 TCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTC 705252
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| ||||| | ||| || || | || | |||||| || || ||||| |
Sbjct 705253 GCGTTGTAGACCTTGGTGTTGCCGAGAGCCAGGAGCAGGCGGTCGGCGACGAACTCGATG 705312
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | ||| || ||||||||||| | || || || | || ||| || |
Sbjct 705313 TACTGGCACATAAGAGTGGAGTTCATGCCGAGCAGGGCGCAGGGCAGCGCGTCAGTGAGG 705372
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTG-TGCCAGAGACAG 251801
|| ||||| ||| || |||| |||| | || | | || | | | | | |
Sbjct 705373 AACTCCTTCTCGATGACAACGGCCTGGGTGATGATATCTTCGACGAGCTTCTTGTCAGGG 705432
Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861
| | ||| || ||| | ||||| | | || | ||||| |||||||| ||
Sbjct 705433 C-GGGTCTTGAGGAGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGCATGCCCTCGTCACG 705491
Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921
| ||||| ||||||||| | || |||||||| | ||||| ||| ||||||||||
Sbjct 705492 AGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAA 705551
Query 251922 GATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960
||| | ||| |||||| || ||| | | |||||||||
Sbjct 705552 GATGGACGC-AAAGGAGCCGCTGAAGAAGATACCCTCGAC 705590
>seq11
Length=1384065
Score = 84.2 bits (92), Expect = 4e-11
Identities = 107/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 279423 AAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATG 279482
||||||||| | || || ||||| |||| ||||| || | || |||| |||||| |||
Sbjct 715011 AAGCGTGGCCAGCGTTACGGTCTTCTCGGCCCCAACGGTTCTGGAAAGACCACTCTCATG 715070
Query 279483 CGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGT 279541
|||||||| |||| ||| | | ||| ||||| | ||| ||||| | ||| ||
Sbjct 715071 CGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCAGAACGAGGTCAAGACCGT 715129
Query 279542 GTATGTAGAGCACGACATCGACTCC 279566
||| || |||||||| ||||||||
Sbjct 715130 GTACGTTGAGCACGATCTCGACTCC 715154
Score = 84.2 bits (92), Expect = 4e-11
Identities = 103/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| ||||| || ||||| || || || ||| ||||| | ||| | | ||
Sbjct 716335 CTCACTCGCGCATGCGTGGTCTATCCGGTGGTCAGCGTGTCAAGGTCGTCCTTGCCGCCT 716394
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|||| ||||| | |||||| |||||||||| ||||||||||||||||| || |||||
Sbjct 716395 GCTCA-TGGCAGCGTCCTCACTTGATCGTTCTTGACGAGCCTACCAACTACCTCGACCGT 716453
Query 280821 GAGAGCCTGGGCGCTCTG 280838
|| || || ||||||
Sbjct 716454 GACTCGCTTGGTGCTCTG 716471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835996681301
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |