Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8 116 8e-21 seq11 84.2 4e-11 >seq8 Length=2222996 Score = 116 bits (128), Expect = 8e-21 Identities = 269/400 (67%), Gaps = 4/400 (1%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| ||||||||||||||||||||| || Sbjct 705193 TCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTC 705252 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||||| | ||| || || | || | |||||| || || ||||| | Sbjct 705253 GCGTTGTAGACCTTGGTGTTGCCGAGAGCCAGGAGCAGGCGGTCGGCGACGAACTCGATG 705312 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||| || ||||||||||| | || || || | || ||| || | Sbjct 705313 TACTGGCACATAAGAGTGGAGTTCATGCCGAGCAGGGCGCAGGGCAGCGCGTCAGTGAGG 705372 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTG-TGCCAGAGACAG 251801 || ||||| ||| || |||| |||| | || | | || | | | | | | Sbjct 705373 AACTCCTTCTCGATGACAACGGCCTGGGTGATGATATCTTCGACGAGCTTCTTGTCAGGG 705432 Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861 | | ||| || ||| | ||||| | | || | ||||| |||||||| || Sbjct 705433 C-GGGTCTTGAGGAGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGCATGCCCTCGTCACG 705491 Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921 | ||||| ||||||||| | || |||||||| | ||||| ||| |||||||||| Sbjct 705492 AGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAA 705551 Query 251922 GATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 ||| | ||| |||||| || ||| | | ||||||||| Sbjct 705552 GATGGACGC-AAAGGAGCCGCTGAAGAAGATACCCTCGAC 705590 >seq11 Length=1384065 Score = 84.2 bits (92), Expect = 4e-11 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 279423 AAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATG 279482 ||||||||| | || || ||||| |||| ||||| || | || |||| |||||| ||| Sbjct 715011 AAGCGTGGCCAGCGTTACGGTCTTCTCGGCCCCAACGGTTCTGGAAAGACCACTCTCATG 715070 Query 279483 CGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGT 279541 |||||||| |||| ||| | | ||| ||||| | ||| ||||| | ||| || Sbjct 715071 CGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCAGAACGAGGTCAAGACCGT 715129 Query 279542 GTATGTAGAGCACGACATCGACTCC 279566 ||| || |||||||| |||||||| Sbjct 715130 GTACGTTGAGCACGATCTCGACTCC 715154 Score = 84.2 bits (92), Expect = 4e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 ||||||| ||||| || ||||| || || || ||| ||||| | ||| | | || Sbjct 716335 CTCACTCGCGCATGCGTGGTCTATCCGGTGGTCAGCGTGTCAAGGTCGTCCTTGCCGCCT 716394 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 |||| ||||| | |||||| |||||||||| ||||||||||||||||| || ||||| Sbjct 716395 GCTCA-TGGCAGCGTCCTCACTTGATCGTTCTTGACGAGCCTACCAACTACCTCGACCGT 716453 Query 280821 GAGAGCCTGGGCGCTCTG 280838 || || || |||||| Sbjct 716454 GACTCGCTTGGTGCTCTG 716471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835996681301