Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq8 315 1e-80
seq4 230 4e-55
>seq8
Length=2222996
Score = 315 bits (348), Expect = 1e-80
Identities = 392/523 (75%), Gaps = 23/523 (4%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691
|||||||||||||||||||| |||||||| || |||||| | | || | | ||
Sbjct 705680 CCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGCGATGGATCTCT-GACAAGAACTCCAC 705622
Query 42692 GTTCGGCGA-GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCT 42750
|||| ||| | | || | || || ||||||||||||| ||||||||| ||| |||
Sbjct 705621 CTTCG-CGACGCGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCT 705563
Query 42751 TCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAAC 42809
| || |||||||||||||||||| || || || ||||| || || |||||||| |||
Sbjct 705562 TTGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTC-ATGCCTGGTCTTACCTTCTCCAAC 705504
Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869
|| |||||| | |||||||| |||| | ||||| ||||||||||| ||||| |
Sbjct 705503 GAGCTCATCTCTCGTGACGAGGGCATGCACACTGACTTCGCCTGCCTCCTCTTCTC---C 705447
Query 42870 CACCTCAGGCACAAGCCCT-CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928
| ||||| | || ||||| ||| ||| ||| | |||||||| ||||||| |
Sbjct 705446 CTCCTCAAG-ACCCGCCCTGACAAGAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGT 705388
Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGA 42988
|||||||||||||||||||| | |||||||| ||||| ||||||||||| |
Sbjct 705387 CATCGAGAAGGAGTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCAC 705328
Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAG 43048
|| |||||| |||||||| ||| |||||||||| | |||| || ||| |||| |
Sbjct 705327 TCTTATGTGCCAGTACATCGAGTTCGTCGCCGAC---CGCCTGCTCC---TGGCTCTCGG 705274
Query 43049 C--CGCC----TCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGA 43102
| | || |||||||| || | |||||||||||| ||||||||||||||| | |
Sbjct 705273 CAACACCAAGGTCTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGC 705214
Query 43103 GGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||||||||||| |||||||||||||||| ||| ||||||
Sbjct 705213 CGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGATTACCAG 705171
Score = 127 bits (140), Expect = 4e-24
Identities = 203/288 (70%), Gaps = 5/288 (2%)
Strand=Plus/Minus
Query 42301 TCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
||||| |||||||||||||| | || | ||| |||||||||||||||||| || |||
Sbjct 706067 TCTGGCAAATGTACAAGAAGGCCGAAGCT-TCCTTCTGGACCGCCGAGGAGATCGATCTG 706009
Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416
||||||| | || |||| | | || ||| |||| || ||| || |
Sbjct 706008 TCCAAGGATCTGCACGACTGGAACAAGCGCCTCAATGACGACGAGCGCTTCTTCATCTCA 705949
Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476
|| | || ||||||||||| || || ||||| || ||||| |||||| ||| | |
Sbjct 705948 CACGTCCTTGCCTTCTTCGCTGCATCGGACGGTATCGTCAACGAGAACTTGGTCGAGCGA 705889
Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536
|||| |||||| ||| | |||||||| |||||||||||||||||||| ||
Sbjct 705888 TTCAGCGGAGAGGTTCAGATCCCCGAGGCGCGATGCTTCTACGGCTTCCAGATCATGATG 705829
Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATC 42584
|||||| | ||||| ||| ||| || || || |||| ||||||
Sbjct 705828 GAGAACATCCACTCCGAGACATACTCCCTCTTGATCGACACATACATC 705781
>seq4
Length=3244807
Score = 230 bits (254), Expect = 4e-55
Identities = 840/1302 (65%), Gaps = 35/1302 (3%)
Strand=Plus/Plus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || |||||| || ||||| |||| || ||
Sbjct 1907627 GTTGACGACCTGGAACTCACCAGCCAACACGCGACGAGAGTAGATGTTGGAAGTGTAGGG 1907686
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||||| || ||| ||| || || ||||||| || || ||||||||||| | |||
Sbjct 1907687 CTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCAC 1907746
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCA-GTCCC 244268
|||| | ||| | || |||||| || | | ||| ||| ||| | | | |
Sbjct 1907747 GAGCAAAGAGTTGCGGACACCGTGC-------TGGGCAATCTT--CTCCTTCAAAGACGC 1907797
Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328
|| ||| | | ||| | | ||| | ||||||||| | || || | ||||
Sbjct 1907798 CCAGTCCC-ACAAGTCGGTGGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGAG 1907856
Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCT 244388
|| || || || || ||| ||| || ||| || |||||| | ||| |
Sbjct 1907857 AAACAGGAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGACG 1907916
Query 244389 C-GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447
||| | | | |||| |||||||||||| |||||| |||| | | |||| |
Sbjct 1907917 AAGTCAAAG-CTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTCG 1907975
Query 244448 CCGCAGGT--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGA 244505
| || | ||| || || | | || |||| || || || || || || ||||
Sbjct 1907976 --GGAGATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGA 1908033
Query 244506 TGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATG-GCTTCGGGCACGGGGTAAAAGTTG 244564
|||| ||| | ||| | |||| | | | || || || |||||||| ||||
Sbjct 1908034 GACCGACGGGCCGGTGCCTGAAGTTGCT-CTTACGAGCCTCCGGGACGGGGTAGTGGTTG 1908092
Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGA 244624
| ||||| | |||||| | |||||| |||| || | ||| ||| ||| |||
Sbjct 1908093 ACCTCGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGG 1908152
Query 244625 AAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684
||||| || || | |||| ||| ||||| ||||||||
Sbjct 1908153 AAGTCAAACACGCCATTCTTCTCGTCGA------------CAAACCTAGGGAGGGCGAGA 1908200
Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744
||| || ||||| ||||| ||||| || | | |||||||| || ||||| ||||||
Sbjct 1908201 GAGGCAAGATTGCATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAG 1908260
Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804
||||| || ||| || || |||| || || || |||| |||||| ||||||
Sbjct 1908261 AGGTTGGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCC 1908320
Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864
|||||||||||| |||| |||||||| ||| || |||||| | ||| ||
Sbjct 1908321 TTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAGC 1908380
Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924
| | || || ||| || | |||||| || ||||| | || |||||| |||
Sbjct 1908381 TTCTGGGCACGGATGGTCTCACGTCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAGCC 1908440
Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACT 244983
|||||||| || |||| || | || || ||| | ||| ||| || | ||| |
Sbjct 1908441 TCGAACTCCTCACCGTAGACATCTGCGAGACCAGGGGCCT-CGCTGGGACAAAACAGAGT 1908499
Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043
||||||||| || | ||| | || |||||| ||||| || | ||| || || | |||
Sbjct 1908500 CCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAA 1908559
Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103
||||| | | | ||| ||| ||| |||||| | || || | ||| |||
Sbjct 1908560 CAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAA 1908619
Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163
||||| ||||||| ||||||| ||||| |||| ||| || || ||||||||||| ||
Sbjct 1908620 CACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACC 1908679
Query 245164 CTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAG 245222
|||||| || ||| | || | |||| ||| || || |||| | | ||||| |
Sbjct 1908680 CTGGTCAACGTACCTAGC-AGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGG 1908738
Query 245223 AGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGC 245282
|| |||||||| || |||||| | ||| || | | | | | | | || |
Sbjct 1908739 AGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCAGAC 1908798
Query 245283 CTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCT 245342
| | ||||| || ||||||||| | |||||| |||| | ||||| || ||||
Sbjct 1908799 CAATACCGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAGATACCCT 1908858
Query 245343 CCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACA 245384
| |||||||| |||||||| || ||| ||||| || ||||
Sbjct 1908859 CGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACA 1908900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338479941360
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