Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 1e-14 >seq7 Length=2328918 Score = 95.1 bits (104), Expect = 1e-14 Identities = 251/381 (66%), Gaps = 2/381 (1%) Strand=Plus/Plus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| ||| || ||||| ||||||||| | || |||||| ||||||||||| | | Sbjct 1960245 AACATGTGGCAAGGCGGGAGCGCCATCTTCTTCAGGTCCGCGGGGTTCCACGCGCTGAGT 1960304 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 ||||| | | || | || || || || | ||| | | | || || ||||| Sbjct 1960305 ATGATGCGGCGGTCATATGGCTTGTTCTTCAGCTTATCAATGACCTCCGCCAGCTGGTCG 1960364 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGT-CCACGTACGCCGCCCCAAAGTGCCTCCA 20550 | |||||||| |||||||| ||| || || || |||| | || |||||||||| ||| Sbjct 1960365 ACGCCCTGGCCGGTATAGTCTACAT-CGTGTCCCTTGTACTCGGCGCCAAAGTGCCGCCA 1960423 Query 20551 CTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGC 20610 ||||| || || || || || | ||| || ||| ||||| || || | | | Sbjct 1960424 TTGGAAGCCATACACGGGCCCGAGATCGCCTTCCTCGTGGTGCGAGAGCCCCACGCTGTC 1960483 Query 20611 CAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGCTCCCT 20670 ||| |||| | | ||| || |||||| ||||||| || | ||| || | | Sbjct 1960484 GAGGTACTCGCGGCTGCCGTTACCGTCCCAGATCTTGATGCCGGCGTCTGAGAGGGGCTT 1960543 Query 20671 GGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACAC 20730 |||| || || || | |||||| || || || || ||| | ||| || || Sbjct 1960544 CGAGTATGTGCTGCCTGCGACAAACCAGAGGAGTTCGGCTACGACGGCGCGCAGGAAGAC 1960603 Query 20731 CCGCTTTGTGGTTAGTAAGGG 20751 ||||||||||| || | ||| Sbjct 1960604 GCGCTTTGTGGTGAGGAGGGG 1960624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372463453240