Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 5e-14
>seq1
Length=5402283
Score = 93.3 bits (102), Expect = 5e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| |||| || |||||| || |||||||| || | || || || |
Sbjct 3267243 ACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGCGTACGGCC 3267184
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || | |||||| || ||||| ||||| ||||||||||| | || | || |||||
Sbjct 3267183 GTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTT 3267124
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|||| ||| || || | | | | |||||| || ||||| || | |||||
Sbjct 3267123 GTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAGTGTGAT 3267064
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || || || ||||| || || || |||||
Sbjct 3267063 CGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028
Score = 91.5 bits (100), Expect = 2e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
|||| || | ||| | ||| |||||| ||||| ||||| || | ||| || || |
Sbjct 3266786 CGCAGGACGAGATGGAGTGTAGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCA 3266727
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || |||||||| || ||||| || | ||||||||||| | || | | ||||||
Sbjct 3266726 TCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTA 3266667
Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
||| ||| || |||| ||| | | | |||||| |||||| || |||| ||| ||
Sbjct 3266666 TCCTGGATCTTCGACTTGA-CGTTGTCAATCGTGTCAGACGATTCAACTTCGAGCGTAAT 3266608
Query 42173 GGTTTTGCCCGT 42184
||| ||||||||
Sbjct 3266607 GGTCTTGCCCGT 3266596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212385800240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |