Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 280 1e-70 >seq4 Length=3244807 Score = 280 bits (310), Expect = 1e-70 Identities = 1074/1671 (64%), Gaps = 38/1671 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||||| ||||| || |||||| || ||||| ||| || ||||| Sbjct 1909120 AACTACCAATTCTTTGGGTTCAAGACCCTGGAGCGATCATACCTTCTCCGCATCAATGGC 1909061 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| ||||||| || || || |||||||||| || || | || || |||||| | Sbjct 1909060 AAGGTAGCCGAGCGTCCACAGCACATGCTGATGCGTGTAGCTGTGGGCATCCACGGCGAG 1909001 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG--- 93891 || || ||| | | | | | | | |||||| | ||| || || | Sbjct 1909000 GATATTGAGAAGGCTATCGAGACCTAC---GACATGATGTCGCAGAAGTTCTTCACGCAC 1908944 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 || | || || || ||||| ||||| || ||| || || ||||| || || |||||| Sbjct 1908943 GCTTCGCCAACACTTTTCAATGCGGGTACACCGTCTCCTCAAATGTCGTCTTGCTTCCTG 1908884 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 || ||| | |||| ||| |||| || || | ||||| | ||| || || | Sbjct 1908883 ATCGAC-ATGAAGGAAGACAGCATCGAGGGTATCTACGACACGTTGAAGACGTGCGCCAT 1908825 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || || || || || || | | || ||| | | ||||||| || || Sbjct 1908824 GATCTCCAAGACTGCTGGCGGTATTGGTCTGAACGTGCACTGCATTCGTGCCACCGGCTC 1908765 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| | || ||||| || ||||||||||| ||| | |||||||| || |||| ||| Sbjct 1908764 ATACATCGGAGGAACCAACGGTACCTCCAACGGTCTCATTCCTATGCTTCGTGTCTACAA 1908705 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || | ||||| ||||||||||| | | | |||| | ||||| |||| Sbjct 1908704 CAACACTGCTAGGTACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTA 1908645 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 || ||||| |||||||| |||||| ||| | ||| ||||||||||||||||||| Sbjct 1908644 CCTGGAGCCGTGGCACGCAGACGTGTTTAGCTTCCTTGACTTGCGAAAGAACCACGGCAA 1908585 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | || | ||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 1908584 GGAGGAGGTACGTGCGCGTGACCTGTTCTATGCTCTTTGGGTACCGGACCTGTTCATGAA 1908525 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || ||| | | || || |||| ||| |||||||||| || || || || | Sbjct 1908524 GCGTGTCCAAGAGAATGGCGAGTGGACTCTGTTTTGTCCCAGCGAGGCCCCTGGTCTCGC 1908465 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 || || | || | || || | |||| || | |||||| | ||||| | Sbjct 1908464 AGATGTCTACGGTGAGGAGTTCGAGGCTCTGTACGCCAGGTACGAAGCTGAGGGCCGTGG 1908405 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | || || ||| |||||||||| || ||| | || | ||| ||||| Sbjct 1908404 ACGTGAGACCATCCGTGCCCAGAAGCTGTGGTATGCTATCCTCGAGGCTCAGACTGAGAC 1908345 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || | |||||||| | | ||||||| || |||| |||| |||||| || |||| Sbjct 1908344 CGGAAACCCCTACATGCTCTACAAGGACGCTTGCAACCGCAAGAGTAACCAGAAGAACCT 1908285 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 ||| ||| ||||| || || ||||| ||||| ||||||| || | || ||||| Sbjct 1908284 CGGAACTATCCGCAGCTCCAACCTCTGCACTGAGATCATCGAGTACACCGCCCCTGACGA 1908225 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670 | | || || || || || | ||| || ||| | | || || ||| | | | Sbjct 1908224 GGTCGCCGTATGCAATCTTGCCTCTCTCGCCCTCCCTAGGTTTGT-CGA-----CGAGAA 1908171 Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT--CTTG 94728 | | || ||| || | || ||||| | || | ||| || || | Sbjct 1908170 G---AATGGCGTGTTTGACTTCCAGAAGCTTCACGAAGTCAC---TCAGATTGTCACTCG 1908117 Query 94729 -AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787 ||| |||||| | | ||||| ||| |||||||||||||||||| || || Sbjct 1908116 CAACTTGAACAAGATCATCGAGGTCAACCACTACCCCGTCCCGGAGGCTCGTAAGAGCAA 1908057 Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847 | | | ||| |||||| |||| |||| || || ||| | || || | | || | Sbjct 1908056 CTTCAGGCACCGGCCCGTCGGTCTCGGTGTACAAGGTCTTGCTGATACCTTCCTGTCTCT 1907997 Query 94848 GCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907 ||| |||| | ||| ||| ||| || | | || | | || || || | ||| Sbjct 1907996 TCGTATGCCTTTCGAATCTCCCGAGGCTAAGAAACTCAACATCCAGATCTTTGAGACCAT 1907937 Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGA 94967 || ||| || ||| ||| | || |||||| ||| ||| || |||| Sbjct 1907936 CTACCACGCAGCTTTGACTTCGTCCTGCGACCTGGCCA---AGGAGCTCGGACCGTACGA 1907880 Query 94968 ATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAA 95027 | | || || || | ||||||||| | || | |||| | ||| || | Sbjct 1907879 GACATATGAAGGGTCTCCTGTTTCTCAGGGCATTCTCCAATACGACATGTGGAACGTCAC 1907820 Query 95028 GCCCTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGGTGTG 95085 ||| | | ||| ||||||| || | | | | || || | | |||||||| Sbjct 1907819 CCCCACCGACTTGTGGGACTGGGCGTCTTTGAAGGAGAAGA--TTGCCCAGCACGGTGTC 1907762 Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 ||| | |||| ||||| |||||||| || ||||| || |||||||||| || || Sbjct 1907761 CGCAACTCTTTGCTCGTGGCACCCATGCCGACAGCCTCTACTTCGCAGATCCTCGGGTAC 1907702 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 ||||||| ||||| |||| ||| |||||| | ||| | || ||| | || || || Sbjct 1907701 AACGAGTGCTTCGAGCCCTACACTTCCAACATCTACTCTCGTCGCGTGTTGGCTGGTGAG 1907642 Query 95206 TTCCCCGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTGA 95264 |||| ||| ||||| | || | || | || || | |||| | ||| || Sbjct 1907641 TTCCAGGTCGTCAACCCTTGGTTGCTCAAGGATCTTGTCGAC-ATGGGCCTCTGGTCAGA 1907583 Query 95265 CAAGGTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAACATCCCGCAAAT 95321 ||| | ||||||| | | | |||| | || ||| ||||| |||||| | || Sbjct 1907582 CAACATGAAGAACCGAATCAT---CGCCGATGGTGGTTCCATCCAGCGCATCCCCAACAT 1907526 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || || || |||||||| || ||||||||||| ||||| ||| ||||||| Sbjct 1907525 TCCCGATGAGATCAAGGCCCTGTACAAGACCGTTTGGGAAATCTCGCAGCG 1907475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722822773560