Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4 221 1e-52 seq8 152 5e-32 seq1 114 1e-20 seq11 86.0 6e-12 >seq4 Length=3244807 Score = 221 bits (244), Expect = 1e-52 Identities = 932/1450 (64%), Gaps = 39/1450 (3%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || ||||| || |||||||| || | | || | ||| |||| | | Sbjct 1907626 GGTTGACGACCTGGAACTCACCAGCCAACACGCGACGAGAGTAGATGTTGGAAGTGTAGG 1907685 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || ||| | ||||| | || || || || | || | || ||||||||| |||| Sbjct 1907686 GCTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCA 1907745 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 | | |||||| || || | |||||| ||| | |||||||| | | ||| |||| Sbjct 1907746 CGAGCAAAGAGTTGCGGACACCGTGCTGGGCAATCTTCTCCTTCAAAGACGCCCAGTCCC 1907805 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGAC 153267 ||| | | || || |||||||||||||||| || | | || || | ||| Sbjct 1907806 ACAAGTCGGTGGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGAGAAACAGGAG 1907865 Query 153268 TGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 || || | || ||| ||| | | |||| |||| |||||| | | Sbjct 1907866 ACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGG-CCAGGTCGCAGGACGAAGTCAAA 1907924 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGC-TC-- 153383 || | | ||| ||||| || ||| || | ||||| ||||| || || Sbjct 1907925 GCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGT--------TTCTTAGCCTCGG 1907976 Query 153384 -----TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGC 153438 ||| | ||||| || || || |||| || || ||||| || | ||||| | Sbjct 1907977 GAGATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAGAC 1908036 Query 153439 CGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGAT 153498 ||| ||| || ||| | |||||| | || || | ||| ||||| ||| | Sbjct 1908037 CGACGGGCCGGTGCCTGAAGTTGCTCTTACGAGCCTCCGGGACGGGGTAGTGGTTGACCT 1908096 Query 153499 CGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAAT 153558 |||| || ||||| | |||||| || | | ||| | | | ||| |||| ||| | Sbjct 1908097 CGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGGAAGT 1908156 Query 153559 CATAG--GTCATT-TCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTAC 153615 || | | |||| | ||| || || | | | | ||| | ||| || ||||| | Sbjct 1908157 CAAACACGCCATTCTTCTCGTCG---ACAAACCTAGGGAGGGCGAGAGAGGCAAGATTGC 1908213 Query 153616 AGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATT 153675 | ||||| ||| || | | || |||||| | |||||| | |||||||||| || Sbjct 1908214 ATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGC 1908273 Query 153676 TTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGT 153735 || || | || | ||| || || ||||| ||||| ||||| ||| ||||||||| Sbjct 1908274 GGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGT 1908333 Query 153736 ACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATG-CAGGTCCTGCGCTCGC 153794 | || |||||||| || | |||| |||| | || ||| | ||| || || Sbjct 1908334 AGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAG-CATACCACAGCTTCTGGGCACGG 1908392 Query 153795 ACCCGCTGCCGATAGCGGCCCTC-GCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTC 153853 | || || |||||||| ||| ||||| | ||||||| ||| ||||| || Sbjct 1908393 ATGGTCTCACGTCCACGGCCCTCAGCT-TCGTACCTGGCGTACAGAGCCTCGAACTCCTC 1908451 Query 153854 GCCGTAGCAGTCGGCGAGGCCGGGACACT-GATGCGGACACATCAGCGACCACATATCGT 153912 |||||| || ||||| || || || | || ||||| | ||| | |||| | | Sbjct 1908452 ACCGTAGACATCTGCGAGACCAGGGGCCTCGCTG-GGACAAAACAGAGTCCACTCGCCAT 1908510 Query 153913 CGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCG 153972 | | ||| || ||||||||| ||||| ||||| || || || | ||||| |||| Sbjct 1908511 TCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAACAGGTCACGCG 1908570 Query 153973 C-CTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCG 154031 | | | | |||||| ||| ||| | || | || | |||| | | ||| ||| Sbjct 1908571 CACGTACC-TCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACACGTCTGCG 1908629 Query 154032 TGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACG 154088 ||||| || || | ||||| ||| | |||||| |||||| || ||||| || ||| Sbjct 1908630 TGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACG 1908689 Query 154089 TGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTG 154148 | | | | |||||| |||| || | ||| || || ||| | | ||| |||||| Sbjct 1908690 TACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTG 1908749 Query 154149 GTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCC- 154207 || ||| | |||| ||| || | |||||||| | ||||| ||||| Sbjct 1908750 GTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGCCA 1908809 Query 154208 GCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTAT 154266 || || ||| || || ||||| ||| | | ||| |||||| || |||||||| | Sbjct 1908810 GCAGT-CTTGGAGATCATGGCGCACGTCTTCAA-CGTGTCGTAGATACCCTCGATGCTGT 1908867 Query 154267 CGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAA 154326 | || | | ||| || ||| || || ||||||| ||| | || ||||| | Sbjct 1908868 CTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGTGTACCCGCATTGA 1908927 Query 154327 AGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGG 154386 | || || || |||||||| || | || || ||||||| ||| || ||||| | Sbjct 1908928 AAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGATAG 1908987 Query 154387 CGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGAC 154446 | | || ||||| |||||||| ||||| | || || ||||| ||||||||||| |||| Sbjct 1908988 CCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTGGAC 1909047 Query 154447 GTTCGGCGAC 154456 | ||||| || Sbjct 1909048 GCTCGGCTAC 1909057 >seq8 Length=2222996 Score = 152 bits (168), Expect = 5e-32 Identities = 301/442 (68%), Gaps = 25/442 (6%) Strand=Plus/Minus Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466 || |||||| |||||||| | || || |||| |||||| ||||||| | | Sbjct 705602 GCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTTGCGTCCATCTTCTGGCTC 705543 Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526 || | | ||| | ||||| || || || ||| ||||||| | || || || ||||| Sbjct 705542 AAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 705483 Query 52527 GGACTGCACACGGACTTTGCGTGCCTCTACTAC---------AAGACGCGCG-TGACCGA 52576 || ||||||| ||||| || |||||| || | ||||| ||| |||| Sbjct 705482 GGCATGCACACTGACTTCGCCTGCCTCCTCTTCTCCCTCCTCAAGACCCGCCCTGACAAG 705423 Query 52577 AAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGA 52636 || | | ||| | ||| || ||| |||| || | ||||| ||||| Sbjct 705422 AAGCTCG---TCGAA---GAT-------ATCATCACCCAGGCCGTTGTCATCGAGAAGGA 705376 Query 52637 GTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC-ATGTGCG 52695 ||| | || | ||||||||| || ||||| ||||||||| | || || |||||| Sbjct 705375 GTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTC-CACTCTTATGTGCC 705317 Query 52696 AGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCA 52755 ||||||||||||| || || || || ||| | || ||||| | | ||| || || Sbjct 705316 AGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGCTCTCGGCAACACCAAGGTCTACA 705257 Query 52756 ACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTT 52815 |||| ||| || || || || ||| | ||||| ||||||| |||||||||||||| | Sbjct 705256 ACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCAACTTCT 705197 Query 52816 TCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||| |||||||| || Sbjct 705196 TCGAGAAGCGCGTCGGCGATTA 705175 >seq1 Length=5402283 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| ||| | || || || | | | |||||||| || || ||||||||| Sbjct 3267255 GCCGCCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGA 3267196 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||| || | || || || | |||| |||||||| |||||||| || Sbjct 3267195 AAGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGG 3267136 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | |||||||| |||||||| Sbjct 3267135 AATGCCTTCCTTGTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCAC 3267076 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||| ||||| || ||||| || || ||||||||||| Sbjct 3267075 CTCCAGTGTGATCGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || || || | | | || ||||| ||||||||||||||| Sbjct 3267026 CCGCCACGGAGACGAAGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAA 3266967 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| || | || || || | |||| |||||||| || |||||||| Sbjct 3266966 AGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGA 3266907 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || | ||| || | ||| |||| ||||| | Sbjct 3266906 ATACCCTCCTTGTC-TTGAATCTTGGACTTCACGTTG-TCGATGGTATCGGATGACTCGA 3266849 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | || || || |||| || || ||||| |||||||| Sbjct 3266848 CTTCGAGGGTGATGGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800 >seq11 Length=1384065 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| ||| | || || || | | | |||||||| || |||||||||||| Sbjct 1031211 GCCGCCGCGCAGACGAAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 1031270 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||||||| || || |||| |||| || ||||| |||||||| || Sbjct 1031271 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 1031330 Query 138507 TATACCTTCTTTGTC 138521 || ||||| ||||| Sbjct 1031331 GATGCCTTCCTTGTC 1031345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262021599920