Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq4 221 1e-52
seq8 152 5e-32
seq1 114 1e-20
seq11 86.0 6e-12
>seq4
Length=3244807
Score = 221 bits (244), Expect = 1e-52
Identities = 932/1450 (64%), Gaps = 39/1450 (3%)
Strand=Plus/Plus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
||||||| || || ||||| || |||||||| || | | || | ||| |||| | |
Sbjct 1907626 GGTTGACGACCTGGAACTCACCAGCCAACACGCGACGAGAGTAGATGTTGGAAGTGTAGG 1907685
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
| || ||| | ||||| | || || || || | || | || ||||||||| ||||
Sbjct 1907686 GCTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCA 1907745
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207
| | |||||| || || | |||||| ||| | |||||||| | | ||| ||||
Sbjct 1907746 CGAGCAAAGAGTTGCGGACACCGTGCTGGGCAATCTTCTCCTTCAAAGACGCCCAGTCCC 1907805
Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGAC 153267
||| | | || || |||||||||||||||| || | | || || | |||
Sbjct 1907806 ACAAGTCGGTGGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGAGAAACAGGAG 1907865
Query 153268 TGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326
|| || | || ||| ||| | | |||| |||| |||||| | |
Sbjct 1907866 ACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGG-CCAGGTCGCAGGACGAAGTCAAA 1907924
Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGC-TC-- 153383
|| | | ||| ||||| || ||| || | ||||| ||||| || ||
Sbjct 1907925 GCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGT--------TTCTTAGCCTCGG 1907976
Query 153384 -----TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGC 153438
||| | ||||| || || || |||| || || ||||| || | ||||| |
Sbjct 1907977 GAGATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAGAC 1908036
Query 153439 CGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGAT 153498
||| ||| || ||| | |||||| | || || | ||| ||||| ||| |
Sbjct 1908037 CGACGGGCCGGTGCCTGAAGTTGCTCTTACGAGCCTCCGGGACGGGGTAGTGGTTGACCT 1908096
Query 153499 CGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAAT 153558
|||| || ||||| | |||||| || | | ||| | | | ||| |||| ||| |
Sbjct 1908097 CGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGGAAGT 1908156
Query 153559 CATAG--GTCATT-TCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTAC 153615
|| | | |||| | ||| || || | | | | ||| | ||| || ||||| |
Sbjct 1908157 CAAACACGCCATTCTTCTCGTCG---ACAAACCTAGGGAGGGCGAGAGAGGCAAGATTGC 1908213
Query 153616 AGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATT 153675
| ||||| ||| || | | || |||||| | |||||| | |||||||||| ||
Sbjct 1908214 ATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGC 1908273
Query 153676 TTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGT 153735
|| || | || | ||| || || ||||| ||||| ||||| ||| |||||||||
Sbjct 1908274 GGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGT 1908333
Query 153736 ACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATG-CAGGTCCTGCGCTCGC 153794
| || |||||||| || | |||| |||| | || ||| | ||| || ||
Sbjct 1908334 AGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAG-CATACCACAGCTTCTGGGCACGG 1908392
Query 153795 ACCCGCTGCCGATAGCGGCCCTC-GCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTC 153853
| || || |||||||| ||| ||||| | ||||||| ||| ||||| ||
Sbjct 1908393 ATGGTCTCACGTCCACGGCCCTCAGCT-TCGTACCTGGCGTACAGAGCCTCGAACTCCTC 1908451
Query 153854 GCCGTAGCAGTCGGCGAGGCCGGGACACT-GATGCGGACACATCAGCGACCACATATCGT 153912
|||||| || ||||| || || || | || ||||| | ||| | |||| | |
Sbjct 1908452 ACCGTAGACATCTGCGAGACCAGGGGCCTCGCTG-GGACAAAACAGAGTCCACTCGCCAT 1908510
Query 153913 CGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCG 153972
| | ||| || ||||||||| ||||| ||||| || || || | ||||| ||||
Sbjct 1908511 TCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAACAGGTCACGCG 1908570
Query 153973 C-CTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCG 154031
| | | | |||||| ||| ||| | || | || | |||| | | ||| |||
Sbjct 1908571 CACGTACC-TCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACACGTCTGCG 1908629
Query 154032 TGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACG 154088
||||| || || | ||||| ||| | |||||| |||||| || ||||| || |||
Sbjct 1908630 TGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACG 1908689
Query 154089 TGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTG 154148
| | | | |||||| |||| || | ||| || || ||| | | ||| ||||||
Sbjct 1908690 TACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTG 1908749
Query 154149 GTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCC- 154207
|| ||| | |||| ||| || | |||||||| | ||||| |||||
Sbjct 1908750 GTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGCCA 1908809
Query 154208 GCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTAT 154266
|| || ||| || || ||||| ||| | | ||| |||||| || |||||||| |
Sbjct 1908810 GCAGT-CTTGGAGATCATGGCGCACGTCTTCAA-CGTGTCGTAGATACCCTCGATGCTGT 1908867
Query 154267 CGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAA 154326
| || | | ||| || ||| || || ||||||| ||| | || ||||| |
Sbjct 1908868 CTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGTGTACCCGCATTGA 1908927
Query 154327 AGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGG 154386
| || || || |||||||| || | || || ||||||| ||| || ||||| |
Sbjct 1908928 AAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGATAG 1908987
Query 154387 CGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGAC 154446
| | || ||||| |||||||| ||||| | || || ||||| ||||||||||| ||||
Sbjct 1908988 CCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTGGAC 1909047
Query 154447 GTTCGGCGAC 154456
| ||||| ||
Sbjct 1909048 GCTCGGCTAC 1909057
>seq8
Length=2222996
Score = 152 bits (168), Expect = 5e-32
Identities = 301/442 (68%), Gaps = 25/442 (6%)
Strand=Plus/Minus
Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466
|| |||||| |||||||| | || || |||| |||||| ||||||| | |
Sbjct 705602 GCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTTGCGTCCATCTTCTGGCTC 705543
Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526
|| | | ||| | ||||| || || || ||| ||||||| | || || || |||||
Sbjct 705542 AAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 705483
Query 52527 GGACTGCACACGGACTTTGCGTGCCTCTACTAC---------AAGACGCGCG-TGACCGA 52576
|| ||||||| ||||| || |||||| || | ||||| ||| ||||
Sbjct 705482 GGCATGCACACTGACTTCGCCTGCCTCCTCTTCTCCCTCCTCAAGACCCGCCCTGACAAG 705423
Query 52577 AAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGA 52636
|| | | ||| | ||| || ||| |||| || | ||||| |||||
Sbjct 705422 AAGCTCG---TCGAA---GAT-------ATCATCACCCAGGCCGTTGTCATCGAGAAGGA 705376
Query 52637 GTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC-ATGTGCG 52695
||| | || | ||||||||| || ||||| ||||||||| | || || ||||||
Sbjct 705375 GTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTC-CACTCTTATGTGCC 705317
Query 52696 AGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCA 52755
||||||||||||| || || || || ||| | || ||||| | | ||| || ||
Sbjct 705316 AGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGCTCTCGGCAACACCAAGGTCTACA 705257
Query 52756 ACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTT 52815
|||| ||| || || || || ||| | ||||| ||||||| |||||||||||||| |
Sbjct 705256 ACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCAACTTCT 705197
Query 52816 TCGAGAAGCGAGTCGGCGAGTA 52837
|||||||||| |||||||| ||
Sbjct 705196 TCGAGAAGCGCGTCGGCGATTA 705175
>seq1
Length=5402283
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
|||||| |||| ||| | || || || | | | |||||||| || || |||||||||
Sbjct 3267255 GCCGCCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGA 3267196
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||||| ||| || | || || || | |||| |||||||| |||||||| ||
Sbjct 3267195 AAGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGG 3267136
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| || || | | || | |||||||| ||||||||
Sbjct 3267135 AATGCCTTCCTTGTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCAC 3267076
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | ||| ||||| || ||||| || || |||||||||||
Sbjct 3267075 CTCCAGTGTGATCGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| || | ||| | || || || | | | || ||||| |||||||||||||||
Sbjct 3267026 CCGCCACGGAGACGAAGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAA 3266967
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| ||| || | || || || | |||| |||||||| || ||||||||
Sbjct 3266966 AGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGA 3266907
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| || ||||| ||| | || | || | ||| || | ||| |||| ||||| |
Sbjct 3266906 ATACCCTCCTTGTC-TTGAATCTTGGACTTCACGTTG-TCGATGGTATCGGATGACTCGA 3266849
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| |||| || | || || || |||| || || ||||| ||||||||
Sbjct 3266848 CTTCGAGGGTGATGGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800
>seq11
Length=1384065
Score = 86.0 bits (94), Expect = 6e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
|||||| |||| ||| | || || || | | | |||||||| || ||||||||||||
Sbjct 1031211 GCCGCCGCGCAGACGAAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 1031270
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || || ||||||||| || || |||| |||| || ||||| |||||||| ||
Sbjct 1031271 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 1031330
Query 138507 TATACCTTCTTTGTC 138521
|| ||||| |||||
Sbjct 1031331 GATGCCTTCCTTGTC 1031345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262021599920
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