Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq4 154 1e-32 seq8 125 7e-24 seq1 104 2e-17 >seq4 Length=3244807 Score = 154 bits (170), Expect = 1e-32 Identities = 968/1529 (63%), Gaps = 52/1529 (3%) Strand=Plus/Plus Query 146063 GGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA-TACACGTTGCTGGTGAAC 146121 ||||||| ||||| ||||| || || | ||||| | ||| || | |||| ||| | Sbjct 1907626 GGTTGACGACCTGGAACTCACCAGCCAACACGCGACG-AGAGTAGATGTTGGAAGTGTAG 1907684 Query 146122 GGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCC 146181 |||||||| ||||||||| ||||| ||||||| || | || || |||||| ||| Sbjct 1907685 GGCTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCC 1907744 Query 146182 ACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAATT 146240 || ||||||||||| | || ||||| || | |||||| ||| | | ||| | Sbjct 1907745 ACGAGCAAAGAGTTGCGGACACCGTG-CTGGGCAATCTTCTCCTTCAAAGACGCCCAGTC 1907803 Query 146241 CCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCC--GCGGAAC 146298 |||||| | | ||||| || || | ||||||| || | | |||| | | ||| Sbjct 1907804 CCACAAGT---CGGTGGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGAGAAAC 1907860 Query 146299 AGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCT 146358 ||| | | ||| || | || || || ||| ||||||||| |||||| | Sbjct 1907861 AGGAGACCCTTCA--TATGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGACGAA 1907918 Query 146359 TCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTGGCCTCCTCG 146418 || ||| | ||| |||||||| |||| | ||||| || | ||||| Sbjct 1907919 GTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTCGGGA 1907978 Query 146419 CTGTCGTAGGGGATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCA 146478 ||| | || ||| ||| || |||| || || ||||| |||| |||| ||| Sbjct 1907979 GATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAGACCG 1908038 Query 146479 ACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCG 146538 ||||| ||||| | ||| || || ||| ||| ||| ||||||||| ||| Sbjct 1908039 ACGGGCCGGTGCCTGAAGTTGCTCTTACGAGCCTCCGGGACGGGGTAGTGGTTGACCTCG 1908098 Query 146539 ATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCA---GGACATAG 146595 ||||||||||| | || || |||||| | || | | ||| ||| || Sbjct 1908099 ATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGGA---AG 1908155 Query 146596 TCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACAT 146655 ||||| | | || ||| ||| || | || ||||| |||||| | || ||| Sbjct 1908156 TCAAACACGCCATTCTTCTCGTCGACAAACCTAGGGAGGGCGAGAGAGGCAAGATTGCAT 1908215 Query 146656 ACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTG 146715 ||||| |||||| | || |||| | ||||| | |||||||||| || | Sbjct 1908216 ACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGG 1908275 Query 146716 ATGATGCCCAAAtttttttGGTTACTAAACTTG---TTGCAGGGGTCCTTGTAGAGCATG 146772 || | || | || || |||||||| |||| ||||| | |||||||||||||||| Sbjct 1908276 ATAGTTCCGAGGTTCTTCTGGTTACT---CTTGCGGTTGCAAGCGTCCTTGTAGAGCATG 1908332 Query 146773 TACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACAAATCT-CTGGCCTT 146831 || || ||||| || | | ||||| ||| | | | || | || |||| | Sbjct 1908333 TAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGAT--AGCATACCACAGCTTCTGGGCAC 1908390 Query 146832 TACTTGTCTTTCGTACAGTTTATTCTT-TTCGTATTTCTCGTACAATATTTCAAAACTAG 146890 | |||| ||| || || |||||| | |||||| || || Sbjct 1908391 GGATGGTCTCACGTCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCT 1908450 Query 146891 AACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTAT 146950 |||||| | || ||| || || || ||||||| ||||| | ||| || || Sbjct 1908451 CACCGTAGACATCTGCGAGACCAGGGGCCTCGCTGGGACAAAACAGAGTCCACTCGCCAT 1908510 Query 146951 TCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAG-GCCCAGCATCAAGTCGCGA 147009 |||| | || || | ||| |||| || || | |||||| || || | || ||| || Sbjct 1908511 TCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAA-CAGGTCACGC 1908569 Query 147010 GCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAA-ATTTCCGG 147068 || | ||||| ||| ||| || ||||| |||| | | || | || | Sbjct 1908570 GCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGA-AGCTAAACACGTCTGC 1908628 Query 147069 ATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTA---CCGCCCTGATCGAC 147125 ||||| ||||||| ||| ||||| || || ||||| || ||||| || || Sbjct 1908629 GTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAAC 1908688 Query 147126 GTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGGATTTTGTGGT 147185 || | | |||| ||| |||| || | ||| | | ||| ||| ||| | | | Sbjct 1908689 GTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTT 1908748 Query 147186 G------CCGTTGTATTGAGC-GCTGAC------GCTTTGCACGCTCAGCCCGAGACCTC 147232 | ||| ||||| |||| | || | || |||||| |||| || | ||| | Sbjct 1908749 GGTTCCTCCGATGTAT-GAGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGC 1908807 Query 147233 CGCCCAGATTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGT 147292 | | || || |||| ||| || | ||| || | |||||| || |||||||||| Sbjct 1908808 CAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAGATACCCTCGATGCTGT 1908867 Query 147293 CTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGACGAC-ACGTGCCCGCCGCA 147351 ||||||| ||| |||||| || || ||||||| ||| ||| || ||||| Sbjct 1908868 CTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGA-GACGGTGTACCCGCATTG 1908926 Query 147352 AACAGCGTGGGGCTGGCGTGCGTGAACGTGCCCAGACTCATCAATTGATACGTTTCAATG 147411 || || || || ||||||||||| | | ||||| | || || || || Sbjct 1908927 AAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGATA 1908986 Query 147412 GCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGT 147471 || || || || |||||||| ||| ||| || || ||||| ||||||||||| || Sbjct 1908987 GCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTGGA 1909046 Query 147472 CGTTCCGCAATCACGTCATTGACTTTTAATAGATATCCATTGGT-CAGAGTTTTGAAACC 147530 || || || | | | |||||| | || ||| || | | ||| || ||||| || Sbjct 1909047 CGCTCGGCTACCTTGCCATTGATGCGGAGAAGGTAT-GATCGCTCCAGGGTCTTGAACCC 1909105 Query 147531 AAAGTACTTGTAGTCGTAGTCCCTGTTGT 147559 |||| | | ||||| | |||| | || || Sbjct 1909106 AAAGAATTGGTAGTTGAAGTCGCGGTCGT 1909134 >seq8 Length=2222996 Score = 125 bits (138), Expect = 7e-24 Identities = 295/444 (66%), Gaps = 11/444 (2%) Strand=Plus/Minus Query 47139 CGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATA 47198 ||| | ||||| |||||| ||||||||| |||||||| ||| ||||||| | || Sbjct 705611 CGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTTGCGTCCATC 705552 Query 47199 TTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCG 47258 || | | || | || | ||||| || || || || ||||||||| ||||| Sbjct 705551 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCT 705492 Query 47259 AGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAA 47318 | ||||| ||| ||||||| |||| ||||| ||| || | | || |||| Sbjct 705491 CGTGACGAGGGCATGCACACTGACTTCGCCTGCCTCCTCTTCTCCC------TCC-TCAA 705439 Query 47319 AAGTTG----GACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGAT 47374 | | ||| | |||| || || | || | ||||| | ||| |||| Sbjct 705438 GACCCGCCCTGACAAGAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCATCGAGAA 705379 Query 47375 GGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAG 47434 |||||| || | || || |||||| | | | || |||||| | | ||| | Sbjct 705378 GGAGTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCACTCTTATGTG 705319 Query 47435 AAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTA 47494 |||||||||| || |||||||||||||||||| | || | ||||| | || Sbjct 705318 CCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGCTCTCGGCAACACCAAGGTCTA 705259 Query 47495 CCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTT 47554 | || | || || ||||| || ||| | ||||| ||||| | |||||||||||||| Sbjct 705258 CAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCAACTT 705199 Query 47555 TTTCGAGAAGCGCGTCGGCGAATA 47578 |||||||||||||||||||| || Sbjct 705198 CTTCGAGAAGCGCGTCGGCGATTA 705175 >seq1 Length=5402283 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || || || || ||||| ||||| ||| | ||| || || || Sbjct 3267009 CACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCTTC 3266950 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 | ||| || || ||| |||| | ||||||||||| ||||| || ||||||||||| Sbjct 3266949 CAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCTTG 3266890 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 || || ||| | ||||| ||| ||| || | ||||||||||| ||| | || | Sbjct 3266889 AATCTTGGACTTCACGTTGT-CGATGGTATCGGATGACTCGACTTCGAGGGTGATGGTCT 3266831 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||||| || || ||||| |||||||| Sbjct 3266830 TGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | |||||||| || || |||||||| ||| | ||| || || || Sbjct 3267237 CACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGCGTACGGCCGTCTTC 3267178 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 | ||| || || ||| |||| | |||||||| || || || ||||| ||||||||| Sbjct 3267177 CAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTG 3267118 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||| ||| ||| | | |||| |||||| | ||| || || | || | ||| || Sbjct 3267117 GATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAGTGTGATCGTCTT 3267058 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| ||||| || || ||||||||||| Sbjct 3267057 ACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | || | ||| || || || || || |||||||| | Sbjct 3266515 CCACCGCGCAGGCGGAGGACGAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAATCAGAC 3266456 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || ||| ||||||| || ||||| || || || Sbjct 3266455 AGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCCGGCGGG 3266396 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | |||| |||||| | | ||| || Sbjct 3266395 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 3266336 Query 127067 TCGACGGTCACCGTTTTGCCGGT 127089 || | ||| | || |||||||| Sbjct 3266335 TCCAAGGTGATGGTCTTGCCGGT 3266313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500437430640