Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq4 154 1e-32
seq8 125 7e-24
seq1 104 2e-17
>seq4
Length=3244807
Score = 154 bits (170), Expect = 1e-32
Identities = 968/1529 (63%), Gaps = 52/1529 (3%)
Strand=Plus/Plus
Query 146063 GGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA-TACACGTTGCTGGTGAAC 146121
||||||| ||||| ||||| || || | ||||| | ||| || | |||| ||| |
Sbjct 1907626 GGTTGACGACCTGGAACTCACCAGCCAACACGCGACG-AGAGTAGATGTTGGAAGTGTAG 1907684
Query 146122 GGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCC 146181
|||||||| ||||||||| ||||| ||||||| || | || || |||||| |||
Sbjct 1907685 GGCTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCC 1907744
Query 146182 ACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAATT 146240
|| ||||||||||| | || ||||| || | |||||| ||| | | ||| |
Sbjct 1907745 ACGAGCAAAGAGTTGCGGACACCGTG-CTGGGCAATCTTCTCCTTCAAAGACGCCCAGTC 1907803
Query 146241 CCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCC--GCGGAAC 146298
|||||| | | ||||| || || | ||||||| || | | |||| | | |||
Sbjct 1907804 CCACAAGT---CGGTGGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGAGAAAC 1907860
Query 146299 AGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCT 146358
||| | | ||| || | || || || ||| ||||||||| |||||| |
Sbjct 1907861 AGGAGACCCTTCA--TATGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGACGAA 1907918
Query 146359 TCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTGGCCTCCTCG 146418
|| ||| | ||| |||||||| |||| | ||||| || | |||||
Sbjct 1907919 GTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTCGGGA 1907978
Query 146419 CTGTCGTAGGGGATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCA 146478
||| | || ||| ||| || |||| || || ||||| |||| |||| |||
Sbjct 1907979 GATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAGACCG 1908038
Query 146479 ACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCG 146538
||||| ||||| | ||| || || ||| ||| ||| ||||||||| |||
Sbjct 1908039 ACGGGCCGGTGCCTGAAGTTGCTCTTACGAGCCTCCGGGACGGGGTAGTGGTTGACCTCG 1908098
Query 146539 ATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCA---GGACATAG 146595
||||||||||| | || || |||||| | || | | ||| ||| ||
Sbjct 1908099 ATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGGA---AG 1908155
Query 146596 TCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACAT 146655
||||| | | || ||| ||| || | || ||||| |||||| | || |||
Sbjct 1908156 TCAAACACGCCATTCTTCTCGTCGACAAACCTAGGGAGGGCGAGAGAGGCAAGATTGCAT 1908215
Query 146656 ACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTG 146715
||||| |||||| | || |||| | ||||| | |||||||||| || |
Sbjct 1908216 ACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGG 1908275
Query 146716 ATGATGCCCAAAtttttttGGTTACTAAACTTG---TTGCAGGGGTCCTTGTAGAGCATG 146772
|| | || | || || |||||||| |||| ||||| | ||||||||||||||||
Sbjct 1908276 ATAGTTCCGAGGTTCTTCTGGTTACT---CTTGCGGTTGCAAGCGTCCTTGTAGAGCATG 1908332
Query 146773 TACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACAAATCT-CTGGCCTT 146831
|| || ||||| || | | ||||| ||| | | | || | || |||| |
Sbjct 1908333 TAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGAT--AGCATACCACAGCTTCTGGGCAC 1908390
Query 146832 TACTTGTCTTTCGTACAGTTTATTCTT-TTCGTATTTCTCGTACAATATTTCAAAACTAG 146890
| |||| ||| || || |||||| | |||||| || ||
Sbjct 1908391 GGATGGTCTCACGTCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCT 1908450
Query 146891 AACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTAT 146950
|||||| | || ||| || || || ||||||| ||||| | ||| || ||
Sbjct 1908451 CACCGTAGACATCTGCGAGACCAGGGGCCTCGCTGGGACAAAACAGAGTCCACTCGCCAT 1908510
Query 146951 TCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAG-GCCCAGCATCAAGTCGCGA 147009
|||| | || || | ||| |||| || || | |||||| || || | || ||| ||
Sbjct 1908511 TCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAA-CAGGTCACGC 1908569
Query 147010 GCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAA-ATTTCCGG 147068
|| | ||||| ||| ||| || ||||| |||| | | || | || |
Sbjct 1908570 GCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGA-AGCTAAACACGTCTGC 1908628
Query 147069 ATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTA---CCGCCCTGATCGAC 147125
||||| ||||||| ||| ||||| || || ||||| || ||||| || ||
Sbjct 1908629 GTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAAC 1908688
Query 147126 GTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGGATTTTGTGGT 147185
|| | | |||| ||| |||| || | ||| | | ||| ||| ||| | | |
Sbjct 1908689 GTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTT 1908748
Query 147186 G------CCGTTGTATTGAGC-GCTGAC------GCTTTGCACGCTCAGCCCGAGACCTC 147232
| ||| ||||| |||| | || | || |||||| |||| || | ||| |
Sbjct 1908749 GGTTCCTCCGATGTAT-GAGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGC 1908807
Query 147233 CGCCCAGATTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGT 147292
| | || || |||| ||| || | ||| || | |||||| || ||||||||||
Sbjct 1908808 CAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAGATACCCTCGATGCTGT 1908867
Query 147293 CTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGACGAC-ACGTGCCCGCCGCA 147351
||||||| ||| |||||| || || ||||||| ||| ||| || |||||
Sbjct 1908868 CTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGA-GACGGTGTACCCGCATTG 1908926
Query 147352 AACAGCGTGGGGCTGGCGTGCGTGAACGTGCCCAGACTCATCAATTGATACGTTTCAATG 147411
|| || || || ||||||||||| | | ||||| | || || || ||
Sbjct 1908927 AAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGATA 1908986
Query 147412 GCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGT 147471
|| || || || |||||||| ||| ||| || || ||||| ||||||||||| ||
Sbjct 1908987 GCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTGGA 1909046
Query 147472 CGTTCCGCAATCACGTCATTGACTTTTAATAGATATCCATTGGT-CAGAGTTTTGAAACC 147530
|| || || | | | |||||| | || ||| || | | ||| || ||||| ||
Sbjct 1909047 CGCTCGGCTACCTTGCCATTGATGCGGAGAAGGTAT-GATCGCTCCAGGGTCTTGAACCC 1909105
Query 147531 AAAGTACTTGTAGTCGTAGTCCCTGTTGT 147559
|||| | | ||||| | |||| | || ||
Sbjct 1909106 AAAGAATTGGTAGTTGAAGTCGCGGTCGT 1909134
>seq8
Length=2222996
Score = 125 bits (138), Expect = 7e-24
Identities = 295/444 (66%), Gaps = 11/444 (2%)
Strand=Plus/Minus
Query 47139 CGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATA 47198
||| | ||||| |||||| ||||||||| |||||||| ||| ||||||| | ||
Sbjct 705611 CGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTTGCGTCCATC 705552
Query 47199 TTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCG 47258
|| | | || | || | ||||| || || || || ||||||||| |||||
Sbjct 705551 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCT 705492
Query 47259 AGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAA 47318
| ||||| ||| ||||||| |||| ||||| ||| || | | || ||||
Sbjct 705491 CGTGACGAGGGCATGCACACTGACTTCGCCTGCCTCCTCTTCTCCC------TCC-TCAA 705439
Query 47319 AAGTTG----GACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGAT 47374
| | ||| | |||| || || | || | ||||| | ||| ||||
Sbjct 705438 GACCCGCCCTGACAAGAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCATCGAGAA 705379
Query 47375 GGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAG 47434
|||||| || | || || |||||| | | | || |||||| | | ||| |
Sbjct 705378 GGAGTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCACTCTTATGTG 705319
Query 47435 AAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTA 47494
|||||||||| || |||||||||||||||||| | || | ||||| | ||
Sbjct 705318 CCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGCTCTCGGCAACACCAAGGTCTA 705259
Query 47495 CCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTT 47554
| || | || || ||||| || ||| | ||||| ||||| | ||||||||||||||
Sbjct 705258 CAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCAACTT 705199
Query 47555 TTTCGAGAAGCGCGTCGGCGAATA 47578
|||||||||||||||||||| ||
Sbjct 705198 CTTCGAGAAGCGCGTCGGCGATTA 705175
>seq1
Length=5402283
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | || || || || ||||| ||||| ||| | ||| || || ||
Sbjct 3267009 CACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCTTC 3266950
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
| ||| || || ||| |||| | ||||||||||| ||||| || |||||||||||
Sbjct 3266949 CAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCTTG 3266890
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|| || ||| | ||||| ||| ||| || | ||||||||||| ||| | || |
Sbjct 3266889 AATCTTGGACTTCACGTTGT-CGATGGTATCGGATGACTCGACTTCGAGGGTGATGGTCT 3266831
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||||||| || || ||||| ||||||||
Sbjct 3266830 TGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | |||||||| || || |||||||| ||| | ||| || || ||
Sbjct 3267237 CACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGCGTACGGCCGTCTTC 3267178
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
| ||| || || ||| |||| | |||||||| || || || ||||| |||||||||
Sbjct 3267177 CAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTG 3267118
Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
||| ||| ||| | | |||| |||||| | ||| || || | || | ||| ||
Sbjct 3267117 GATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAGTGTGATCGTCTT 3267058
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||| ||||| || || |||||||||||
Sbjct 3267057 ACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | || | || | ||| || || || || || |||||||| |
Sbjct 3266515 CCACCGCGCAGGCGGAGGACGAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAATCAGAC 3266456
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || ||||| || || ||| ||||||| || ||||| || || ||
Sbjct 3266455 AGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCCGGCGGG 3266396
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| || ||||| | |||| |||||| | | ||| ||
Sbjct 3266395 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 3266336
Query 127067 TCGACGGTCACCGTTTTGCCGGT 127089
|| | ||| | || ||||||||
Sbjct 3266335 TCCAAGGTGATGGTCTTGCCGGT 3266313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500437430640
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