Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4 273 3e-68 seq8 105 8e-18 >seq4 Length=3244807 Score = 273 bits (302), Expect = 3e-68 Identities = 1085/1690 (64%), Gaps = 43/1690 (3%) Strand=Plus/Plus Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCA---GGCATACATA 115605 ||| | | ||| |||||||||| || ||||| ||||| ||||||| |||| | Sbjct 1907313 GCCATGGTTCGTAGGTAGTACAATCCAGTCTTCAGCCCAAGCTTCCAACCGGCAAAG--- 1907369 Query 115606 TGCATTGAGGACAACTTGGAGAGTGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGGG 115663 ||||| || | | |||| | || || ||| ||||| ||||| || | Sbjct 1907370 TGCATGGACGTGATCTTGCCCATGGTAGGCTCCTTCATATGAAT--GTTCAGCGACTGAG 1907427 Query 115664 ATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTT 115723 | |||||||||||| || || || || | ||| | ||| | | | | ||||| Sbjct 1907428 ACTGATCGATGAAGGCACCACGGTCAGCGGACATCTGAATGATGTTACGCTGCGAGATTT 1907487 Query 115724 CCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAG 115783 |||| || || |||| ||| ||| || ||||| || || | ||| ||||| | Sbjct 1907488 CCCAAACGGTCTTGTACAGGGCCTTGATCTCATCGGGAATGTTGGGGATGCGCTGGATGG 1907547 Query 115784 AGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGA 115843 | ||||| | || || | | |||||| | | ||||||||| || || | | Sbjct 1907548 AACCACCATCGGCGATGATTCGGTTCTTCATGTTGTCTGACCAGAGGCCCATGTCGACAA 1907607 Query 115844 GATCCT----CCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 115899 |||||| | || | | | ||||| || |||||||| || | ||| | Sbjct 1907608 GATCCTTGAGCAACCAAGGG----TTGACGACCTGGAACTCACCAGCCAACACGCGACG- 1907662 Query 115900 AGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGT 115958 ||| |||||||||| ||||| ||||| |||||||| |||| || | ||| || | || Sbjct 1907663 AGAGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGT 1907722 Query 115959 GGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCG 116018 |||||||| ||||||||||||| ||| | |||||||| ||| | ||| Sbjct 1907723 AGAGGCTGTCGGCATGGGTGCCACGAGCAAAGAGTTGCGGACACCGTGCTGGGCAATCTT 1907782 Query 116019 TTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTG 116078 ||||| | | ||||||| | | | | | | |||||| || | || Sbjct 1907783 CTCCTTCAAAGACGCCCAGTCCCACAAGTCGGTGGGGGTGACGTTCCACATGTCGTATTG 1907842 Query 116079 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 116138 ||| || || || || | || || || ||| ||||||| || || || ||| || Sbjct 1907843 GAGAATGCCCTGAGAAACAGGAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGC 1907902 Query 116139 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT 116198 || ||| || || | |||||||| || || |||||||| || | || | Sbjct 1907903 CAGGTCGCAGGACGAAGTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAG 1907962 Query 116199 TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACC 116258 | ||| |||||| || || || | | ||| | | || ||| || ||||| Sbjct 1907963 TTTCTTAGCCTCGGGAGATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACC 1908022 Query 116259 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---AC 116315 ||| |||||||| || | || || || || | || ||| ||||| |||| || Sbjct 1908023 TTGTACACCGAGACCGACGGGCCGGTGCCTGAAGTTGCTCTTACGAGC---CTCCGGGAC 1908079 Query 116316 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 116375 ||| || || ||||| | | | || | || ||||||| || |||| ||| Sbjct 1908080 GGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTC 1908139 Query 116376 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 116435 |||||||| | | | ||||| || | ||| || | |||| || |||| ||||||| Sbjct 1908140 GTGAAGCTTCTGGAAGTCAAACACGCCATTCTTCTCGTCGACAAACCTAGGGAGGGCGAG 1908199 Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495 || || ||||| || || | | ||| || | |||||||| || || || || || Sbjct 1908200 AGAGGCAAGATTGCATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCA 1908259 Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555 | || || || || || || | |||||| || || ||| ||| || || || Sbjct 1908260 GAGGTTGGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTC 1908319 Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA- 116614 |||||||||||| || || | || ||||| || || | || ||| ||||| | ||| | Sbjct 1908320 CTTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAG 1908379 Query 116615 CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGG 116674 | || | ||| | | || | | || ||||| | |||||| | | ||| || | Sbjct 1908380 CTTCTG-GGCACGGATGGTCTCACGTCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAG 1908438 Query 116675 CCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAG 116734 |||| ||||| ||||| | |||| ||| || || |||| ||||| || |||| Sbjct 1908439 CCTCGAACTCCTCACCGTAGACATCTGCGAGACCAGGGGCCTCGCTGGGACAAAACAGAG 1908498 Query 116735 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGA 116794 ||| | ||| ||| | || ||||||||||| ||||| || | ||| || || ||| Sbjct 1908499 TCCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGA 1908558 Query 116795 AGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 116854 | || || || || | || || | || || || ||||| || | ||| | Sbjct 1908559 ACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAA 1908618 Query 116855 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACGA------C 116908 | || ||||||||||| |||||||| | |||| | ||| |||| | Sbjct 1908619 ACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCG---GACGCTTGTTGC 1908675 Query 116909 CAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCAT 116968 || |||||| || ||||| || || ||| | || |||||||| ||||||| ||| | Sbjct 1908676 CACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGT 1908735 Query 116969 CAGATTGGCCATTTGTCCC-CCGAA-TACGAGACTTGTTGGCTCTGACATCGTGGATGTG 117026 || || || || || |||| || ||| | | |||| | | ||| | || Sbjct 1908736 TGGAGGTACCGTTGGTTCCTCCGATGTATGAGCC--GGTGGCACGAATGCAGTGCACGTT 1908793 Query 117027 CATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGAT 117086 || ||||||||| || || ||| ||||| |||||| | | | || ||||||| Sbjct 1908794 CAGACCAATACCGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAGAT 1908853 Query 117087 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGG 117146 || ||||| ||| |||| | |||| |||||||| ||||||||| || || Sbjct 1908854 ACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGG 1908913 Query 117147 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTAT 117205 |||||| || ||||| || ||||| | ||||| |||| | || | || |||||| | | Sbjct 1908914 TGTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGA-ACTTCTGCGACATCATGT 1908972 Query 117206 CGTAGGTCTC 117215 |||||||||| Sbjct 1908973 CGTAGGTCTC 1908982 >seq8 Length=2222996 Score = 105 bits (116), Expect = 8e-18 Identities = 295/446 (66%), Gaps = 14/446 (3%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || ||||| ||||||||||||||||| ||||| || | || ||| |||||||| Sbjct 705174 GTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTCTCCAT 705233 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | | ||| | | ||| || || | | ||| || Sbjct 705234 GAAGTCGAAGGGGTTGGTCGCGTTGTAGACCTTGGTGTTGCCGAGAGCCAG--GAGCAGG 705291 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || || | |||| |||| ||||||| |||| |||||||| |||| ||| Sbjct 705292 CGGTCGGCGACGAACTCGATGTACTGGCACATAAGAGTGGAGTTCATGCCGAGCAGGGCG 705351 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || || |||||||| || |||| ||||||| ||| | || || | | ||| | Sbjct 705352 CAGGGCAGCGCGTCAGTGAGGAACTCCTTCTCGATGACAACGGCCTGGGTGATGATATCT 705411 Query 127469 T-GAATAGTGTC----CACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAA 127523 | || || || || | ||||| || | | | || ||| || || | Sbjct 705412 TCGACGAGCTTCTTGTCAGGGCGGGTCT--TGAGGAGGGAGAAGAGGAGG--CAG-GCGA 705466 Query 127524 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 127583 | || ||| | ||||||||||| |||||||| || || |||||| ||||| |||| Sbjct 705467 AGTCAGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCA 705526 Query 127584 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 127643 |||| || |||||||| | |||||| || | ||| ||||| ||||||||| |||| Sbjct 705527 TGAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCGCTGAAGAAGATACCCT 705586 Query 127644 CCACACACGCGAACGCAAATAGACGC 127669 | || ||||| || | |||||| Sbjct 705587 CGACGGCGGCGAATGCGATGAGACGC 705612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506732200760