Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 1e-16
>seq4
Length=3244807
Score = 102 bits (112), Expect = 1e-16
Identities = 440/685 (64%), Gaps = 8/685 (1%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCAC-GGCAGGCCTGCTTCTCAGATAGTACATGC 203897
|| ||| || |||||||| || | | || ||||| | || ||| || ||||||| |
Sbjct 1907279 CTGGTCTACAGTGAACTGGATAG-GAGCAGAGGCAGCCATGGTTCGTAGGTAGTACAATC 1907337
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
| ||||| || || || ||| ||| | ||||||||| | | |||| || | | |
Sbjct 1907338 CAGTCTTCAGCCCAAGCTTCCAACCGGCAAAGTGCATGGACGTGATCTTGCCCATGGTAG 1907397
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
| || ||| ||||||||||| ||||| || |||||| ||||| || || || |||
Sbjct 1907398 GCTCCTTCATATGAATGTTCAGCGACTGAGACTGATCGATG-AAGGCACCACGGTCAGCG 1907456
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
| ||| | || ||| | |||||| || ||||| || |||||| ||| | | || |
Sbjct 1907457 GACATCTGAATGATGTTACGCTGCGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATC 1907516
Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135
| | || | | | | | || ||| || || ||||| || | || || |
Sbjct 1907517 TCATCGGGAATGT-TGGGGATGCGCTGGATGGAACCACCATCGGCGATGATTCGGTTCTT 1907575
Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195
| | | || ||| | ||||| || || ||| | || ||||||| ||
Sbjct 1907576 CATGTTGTCTGACCAGAGGCCCATGTCGACAAGATCCTTGAGCAACCAAGGGTTGACGAC 1907635
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
||| || || || | || ||| | || | | | | |||| ||| | || |||||
Sbjct 1907636 CTGGAACTCACCAGCCAACACGCGACGAGAGTAGATGTTGGAAGTGTAGGGCTCGAAGCA 1907695
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
|||||||| |||| ||||| | || ||| || |||||||| |||| ||||| ||
Sbjct 1907696 CTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCACGAGCAAAGA 1907755
Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACT 204375
|||||| ||||||| | | | | ||||| ||| | |||||| || | |
Sbjct 1907756 GTTGCGGACACCGTGCTGGGCAATCTTCTCCTTCAAAGACGCCCAGTCCCACAAGTCGGT 1907815
Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTA 204435
||| | ||| |||||||||| | || | ||||| ||| || || || | ||
Sbjct 1907816 GGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGAGAAACAGGAGACCCTTCATA 1907875
Query 204436 CGTCGGATAAGG-CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGT 204494
||| || || | || ||| | ||||| | ||| || | | || || | ||
Sbjct 1907876 TGTCTCGTACGGTCCGA-GCTCCTTGGCCAGGTCGCAGGACGAAGTCAAAGCTGCGTGGT 1907934
Query 204495 ACATGGTCTCAAAGATCTGAACGTT 204519
| ||||||||||||||||| | |||
Sbjct 1907935 AGATGGTCTCAAAGATCTGGATGTT 1907959
Score = 98.7 bits (108), Expect = 2e-15
Identities = 440/679 (65%), Gaps = 16/679 (2%)
Strand=Plus/Plus
Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990
|| ||||||| ||||||||| || | ||||||||| | |||| | || ||||| ||||
Sbjct 1908290 CTTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGTAGGGGTTTCCGGTCTC 1908349
Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACA 205049
|||||| ||| || || ||||| | | || | | | |||||| ||
Sbjct 1908350 AGTCTGAGCCTCG-AGGATAGCATACCACAGCTTCTGGGCACGGA-TGGTCTCACGTCCA 1908407
Query 205050 TC-CCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATC 205108
|| | || ||||| | | |||||| ||| | || || |||||| || ||
Sbjct 1908408 CGGCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCTCACCGTAGACATCTGCG 1908467
Query 205109 AGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCC 205168
|| || || | ||||||| | ||||| |||| || |||| || | || |
Sbjct 1908468 AGACCAGGGGCCTCGCTGGGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACGCTTC 1908527
Query 205169 ATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCC-TAATTCCGTCGTC 205227
|| |||||||| | ||| || | || ||||| ||||| || | || ||| || |
Sbjct 1908528 ATGAACAGGTCCGGTACCCAAAGAGCATAGAACAGGTCACGCGCACGTACCTCC-TCCTT 1908586
Query 205228 TCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACC 205286
|| |||||||| |||||| || |||| | | ||| |||||||||||||| |
Sbjct 1908587 GCCGTGGTTCTTTCGCAAGTCAAGG-AAGCTAAACACGTCTGCGTGCCACGGCTCCAGGT 1908645
Query 205287 ACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGT 205346
| | ||| | || || || | |||||| ||||||||||| || | || | ||
Sbjct 1908646 AGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGT 1908705
Query 205347 TGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCG 205406
|| | || || ||||| || | |||||||||| ||| ||||| || | |||| |
Sbjct 1908706 TGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATG 1908765
Query 205407 AGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCT 205466
|||| || | | | | | | | ||||| ||||||| | ||||| ||||
Sbjct 1908766 AGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGCCAGCAGTCTTGGAGATCA 1908825
Query 205467 GGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC-AC 205524
||||||| |||| || ||| |||||| || ||||| || ||| || |||| |
Sbjct 1908826 TGGCGCACGTCTT-CAACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCA-TGTCGAT 1908883
Query 205525 CAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTG--CCCGCGTGGAAGAGCGTGGGGCTG 205582
||| |||| || | || || | || |||| ||||| | ||| || || ||
Sbjct 1908884 CAGGAAGCAAGACGACA--TTTGAGGAGACGGTGTACCCGCATTGAAAAGTGTTGGCGAA 1908941
Query 205583 GCGTGGCTGAAGCGCTTCT 205601
||||| ||||| |||||
Sbjct 1908942 GCGTGCGTGAAGAACTTCT 1908960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154593694160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |