Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq8 230 2e-55
seq1 125 7e-24
seq11 114 1e-20
seq7 107 2e-18
>seq8
Length=2222996
Score = 230 bits (254), Expect = 2e-55
Identities = 594/908 (65%), Gaps = 63/908 (7%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| ||||| || || || ||||| || ||||| || || || || || || |
Sbjct 705156 CATGACGCCCGCCTTCTGGTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGC 705215
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710
| || ||| | ||| || || |||||||||| | ||||||| ||||||| |
Sbjct 705216 AAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTCGCGTTGTAGACCTTGGTGTTGCC 705275
Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770
|| | | |||||| | |||||| |||||||||||||| || |||| | | ||
Sbjct 705276 GAGAGCCAGGAGCAGGCGGTCGGCGACGAACTCGATGTACTGGCACATAAGAGTGGAGTT 705335
Query 132771 AAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCG 132829
| || ||||| |||| |||||||| || ||||| || | ||||||| | || |
Sbjct 705336 CATGCCGAGCAGGGCGCAG-GGCAGCGCGTCAGTGAGGAACTCCTTCTCGATGACAACGG 705394
Query 132830 CGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACA 132889
| | ||||| ||| || ||| || | | || || | | | ||| |
Sbjct 705395 CCTGGGTGATGATATCTTCGACGAGCTTCTTGTCAGGGCGGGTCTTGAGGAGGGAGAAGA 705454
Query 132890 TCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAG 132949
| ||| || ||||| |||| ||||||||| | || ||||| |||||| ||| |
Sbjct 705455 GGAGGCAGGCGAAGTCAGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGG 705514
Query 132950 TCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAA 133009
| | || ||||||||||| || || |||||||| || |||| || || ||| |
Sbjct 705515 TAAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCGCTGA 705574
Query 133010 AGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGC-TCGCCGAACGTGGCTTCTTTG 133068
|||||| ||||||||||| ||||| || | || ||| |||| ||| |||| | |||
Sbjct 705575 AGAAGATACCCTCGACGGCGGCGAATGCGATGAGACGCGTCGC-GAAGGTGGAGTTCTTG 705633
Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTT-TTCTT--------------TGACGCAC 133113
| |||||| ||||| ||||| |||||||| ||||| |||| | |
Sbjct 705634 TCAGAGATCCATCGCAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAACTGTGACACGC 705693
Query 133114 G--------GCATCG-----------------------------TTTCGATGGCGTTCAA 133136
| || ||| | || |||||||| ||
Sbjct 705694 GTTAGATACGCGTCGCGGGGTATGAGTGCCAAGTAACTTACTGTTGTCAATGGCGTTGAA 705753
Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATT 133194
|| | | | | || | ||| ||| | ||| |||||||| | | || || |
Sbjct 705754 CAG--GTATGTGCGCTGCTTAGGCTCGCTGATGTATGTGTCGATCAAGAGGGAGTATGTC 705811
Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254
|| ||||| | ||||||||| ||| || |||||||| ||||| ||||||||| | |
Sbjct 705812 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGCGCCTCGGGGATC 705871
Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314
|| || ||| ||| |||||||||| || ||||||||||| ||||| || |||
Sbjct 705872 TGAACCTCTCCGCTGAATCGCTCGACCAAGTTCTCGTTGACGATACCGTCCGATGCAGCG 705931
Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC---TCCCAG 133371
|| ||||| || ||||| |||||| |||||||| ||| || | |||| | ||||
Sbjct 705932 AAGAAGGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGGCGCTTGTTCCAG 705991
Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431
||| || ||||||||||| || | ||||||| ||||||| || || || ||||| ||
Sbjct 705992 TCGTGCAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCCTTC 706051
Query 133432 TTGTACAT 133439
||||||||
Sbjct 706052 TTGTACAT 706059
>seq1
Length=5402283
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || ||| | || ||||| ||||||||| |||| |||||| | ||
Sbjct 3266800 ATGCAGATCTTTGTCAAGACGTTGACCGGCAAGACCATCACCCTCGAAGTCGAGTCATCC 3266859
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || || || | ||||| ||||| ||||| | || ||
Sbjct 3266860 GATACCATCGACAACG-TGAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCA 3266918
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| ||| |||| |||| || || || |||||||||
Sbjct 3266919 GCAGCGTCTCATCTTCGCAGGCAAGCAGTTGGAAGACGGCCGTACGCTTTCCGACTACAA 3266978
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || |||||| | || ||||| |||||||| ||| | | |||||
Sbjct 3266979 CATTCAGAAGGAATCCACCCTGCACTTGGTGCTTCGTCTCCGTGGCGG 3267026
Score = 87.8 bits (96), Expect = 2e-12
Identities = 129/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327
|| ||||| ||||||||| | || || ||| | |||||| | | | | | ||
Sbjct 3266313 ACCGGCAAGACCATCACCTTGGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCC 3266372
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAA 38386
|| |||| ||||| ||||| || ||||||| |||| || || | || | ||| |||||
Sbjct 3266373 AAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACCAGCAACGCTTGATCTTCGCCGGCAA 3266431
Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
||||| || || | |||||||| || ||||||||||| |||||| ||||||| ||
Sbjct 3266432 GCAGCTCGAGGATGGTCGCACCCTGTCTGATTACAACATCCAGAAGGAATCGACGCTCCA 3266491
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA-GCGTGCAAACGCTTAAA 38324
|||||||||| ||||| || |||| || || | | |||| | || |||| | ||
Sbjct 3266594 TCACGGGCAAGACCATTACGCTCGAAGTTGAATCGTCTGACACGATTGACAACG-TCAAG 3266652
Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384
|| |||| || || ||||| ||||| | ||||| ||||| | || | ||| |||
Sbjct 3266653 TCGAAGATCCAGGATAAGGAGGGTATTCCTCCGGACCAGCAGCGCTTGATCTTCGCCGGC 3266712
Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444
|| ||||| || || | |||||||| |||||||||||| || ||||| | || ||
Sbjct 3266713 AAGCAGCTTGAGGATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCTACACTC 3266772
Query 38445 CATTTGGTGCTGCG 38458
||| | || |||||
Sbjct 3266773 CATCTCGTCCTGCG 3266786
>seq11
Length=1384065
Score = 114 bits (126), Expect = 1e-20
Identities = 114/145 (79%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAA 38386
|| |||| ||||| || || || ||||||| |||| ||||| || || | ||| |||||
Sbjct 1031354 AAGATCCAGGACAAGGAAGGCAT-CCCGCCGGACCAGCAGCGCCTGATCTTCGCCGGCAA 1031296
Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
||||| || |||| ||||||||| ||||||||||||||| ||||| |||| |||||
Sbjct 1031295 GCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTGCA 1031236
Query 38447 TTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| || ||| || | ||||||
Sbjct 1031235 CTTGGTCCTTCGTCTGCGCGGCGGC 1031211
>seq7
Length=2328918
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| |||||||||||| | ||||| ||||| ||||| | ||| || || ||||| ||
Sbjct 679448 GACAAGGAGGGAATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAG 679389
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|| | ||||||||| ||||||||||||||| ||||| |||| || || ||||| ||
Sbjct 679388 GATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACACTCCACTTGGTCCTC 679329
Query 38457 CG 38458
||
Sbjct 679328 CG 679327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172418618240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |