Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 297 2e-75 seq8 125 9e-24 >seq4 Length=3244807 Score = 297 bits (328), Expect = 2e-75 Identities = 1145/1759 (65%), Gaps = 55/1759 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| | ||||| || || | || ||||| || || |||||||| | | Sbjct 1909045 CCACAGCACATGCTGATGCGTGTAGCTGTGGGCATCCACGGCGAGGATATTGAGAAGGCT 1908986 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||||||| |||||| | | || | |||| ||||| | ||||| || || Sbjct 1908985 ATCGAGACCTACGACATGATGTCGCAGAAGT-TCTTCACGCACGCTTCGCCAACACTTTT 1908927 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| || |||||||| || |||||||| ||| ||||| || | | ||||| || Sbjct 1908926 CAATGCGGGTACACCGTCTCCTCAAATGTCGTCTTGCTTCCTGATCGACATGAAGGAAGA 1908867 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 ||| | || || |||| ||| | | || ||| ||||| ||| ||||| Sbjct 1908866 CAGCATCGAGGGTATCTACGACACGTTGAAGACGTGCGCCATGATCTCCAAGACTGCTGG 1908807 Query 111851 TGGTATCGGGATGCACATCCA-TGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907 ||||| || || || | || || || | |||| | | ||| || | |||| || Sbjct 1908806 CGGTATTGGTCTGAACGTGCACTGCATTC-GTGCCACC--GGCTCATACATCGGAGGAAC 1908750 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || ||| || | ||| | ||||| |||||||| || | ||| ||| || | || Sbjct 1908749 CAACGGTACCTCCAACGGTCTCATTCCTATGCTTCGTGTCTACAACAACACTGCTAGGTA 1908690 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 || |||| | ||| ||||| ||| | |||| |||| || ||||| || Sbjct 1908689 CGTTGACCAGGGTGGCAACAAGCGTCC---GGGTGCCTTCGCCATCTACCTGGAGCCGTG 1908633 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||| || | | |||||||| ||||| ||||| || | ||||||| || Sbjct 1908632 GCACGCAGACGTGTTTAGCTTCCTTGACTTGCGAAAGAACCACGGCAAGGAGGAGGTACG 1908573 Query 112082 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 ||| || || || |||| ||||| ||| | || || || ||||||||| | || | | Sbjct 1908572 -TGCGCGTGACCTGTTCTATGCTCTTTGGGTACCGGACCTGTTCATGAAGCGTGTCCAAG 1908514 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| |||| | ||| |||| |||||||| | |||| || |||||| | |||| | | Sbjct 1908513 AGAATGGCGAGTGGACTCTGTTTTGTCCCAGCGAGGCCCCTGGTCTCGCAGATGTCTACG 1908454 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC-TGCGACG 112259 |||||||||| || || || ||| | | |||||| | || | || | ||| || ||| Sbjct 1908453 GTGAGGAGTTCGAGGCTCTGTACGCCAGGTACGAAGCTGAGGGCCGTG-GACGTGAGACC 1908395 Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 | | || | || | ||||| | ||||| ||| || |||| || ||||| || | || Sbjct 1908394 ATCCGTGC-CCAGAAGCTGTGGTATGCTATCCTCGAGGCTCAGACTGAGACCGGAAACCC 1908336 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 || ||||| ||||| ||||| || |||| |||||||| || ||||| | || || Sbjct 1908335 CTACATGCTCTACAAGGACGCTTGCAACCGCAAGAGTAACCAGAAGAACCTCGGAACTAT 1908276 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438 | || ||||||||||| || || ||| | || | || | | || ||| || || Sbjct 1908275 CCGCAGCTCCAACCTCTGCACTGAGATCATCGAGTACACCGCCCCTGACGAGGTCGCCGT 1908216 Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTT 112496 || || || || || |||| ||||| | || ||| || | ||| | || | | ||| Sbjct 1908215 ATGCAATCTTGCCTCTCTCGCCCTCCCTAGGTTTGTCGA-CGAGA-AGAATGGCGTGTTT 1908158 Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556 || | | || || |||||||| || | | |||||| ||| | |||| | || Sbjct 1908157 GACTTCCAGAAGCTTCACGAAGTCACTCAGATTGTCACTCGCAACTTGAACAAGATCATC 1908098 Query 112557 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616 || || |||||||| | |||||||| || | || ||||| || | Sbjct 1908097 GAGGTCAACCACTACCCCGTCCCGGAGGCTCGTAAGAGCAACTTCAGGCACCGGCCCGTC 1908038 Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT-GATT 112674 ||||||||||| |||||||| || ||| ||| | ||| | ||| | || ||| || | Sbjct 1908037 GGTCTCGGTGTACAAGGTCTTGCTGATACCTTCCTGTCTCT-TCG-TATGCCTTTCGAAT 1907980 Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 | ||| || ||| || |||| | || |||||||| || || ||||| ||| ||| Sbjct 1907979 CTCCCGAGGCTAAGAAACTCAACATCCAGATCTTTGAGACCATCTACCACGCAGCT-TTG 1907921 Query 112735 A-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 112793 | || | || |||| ||| || || || || || | ||| || ||||| Sbjct 1907920 ACTTCGTCCTGCGACCTGGCCAAGGAGCTCGGACCGTACGAGACATATGAAGGGTCTCCT 1907861 Query 112794 GCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC-ACTACGA 112852 | ||| || || | || |||| || |||| |||| || | || | | | | || Sbjct 1907860 GTTTCTCAGGGCATTCTCCAATACGACATGT-GGAACGTCACCCCCACCGACTTGTGGGA 1907802 Query 112853 CTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATG 112910 ||||| || | ||||| || || | ||| | || ||| ||||| | || Sbjct 1907801 CTGGGCGTCTTTGAAGGAGAAGATTGCCCAGCACGGTGTCCGCAAC--TCTTTGCTCGTG 1907744 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 ||||| ||||| |||||||| || | || ||| | || | || || ||||| || ||| Sbjct 1907743 GCACCCATGCCGACAGCCTCTACTTCGCAGATCCTCGGGTACAACGAGTGCTTCGAGCCC 1907684 Query 112971 TACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC-- 113027 ||||| | |||||||| ||| | | | || || ||||| | | |||||| Sbjct 1907683 TACACTTCCAACATCTACTCT-CGTCGCGTGTTGGCTGGTGAGTTCCAGGTCGTCAACCC 1907625 Query 113028 -AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 113086 | ||| |||| || || || || |||||||| | | |||||| | | Sbjct 1907624 TTGGTTGCTCAAGGAT---CTTGTCGACATGGGCCTCTGGTCAGACAACATGAAGAACCG 1907568 Query 113087 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAA 113146 || | | ||||||||||| || || | ||||| ||||| || ||| Sbjct 1907567 AATCATCGCCGATGGTGGTTCCATCCAGCGCATCCCCAACATTCCCGATGAGATCAAGGC 1907508 Query 113147 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 113206 ||||| || |||||||||||| | | | ||||| | ||| |||| || || Sbjct 1907507 CCTGTACAAGACCGTTTGGGAAATCTCGCAGCGTAACATCATTCAGATGTCCGCTGACCG 1907448 Query 113207 TGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAG--TCCAACGA 113262 |||| |||||| |||| |||| ||| |||| |||||| ||| || || | Sbjct 1907447 TGGTGCCTTCATCGATC--AGTCTCAGTCGCTGAA--CATTCATATGAAGGAGCCTACCA 1907392 Query 113263 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 113322 || |||| || | || |||||| | | |||||||| || || || || || ||| Sbjct 1907391 TGGGCAAGATCACGTCCATGCACTTTGCCGGTTGGAAGCTTGGGCTGAAGACTGGATTGT 1907332 Query 113323 ATTACCTCCGATCTAAGGC 113341 | ||||| ||| | | ||| Sbjct 1907331 ACTACCTACGAACCATGGC 1907313 >seq8 Length=2222996 Score = 125 bits (138), Expect = 9e-24 Identities = 156/210 (74%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAG 102164 |||||||| || || | ||||| || || |||||| || ||| | ||| | || Sbjct 705686 ACAGTTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGACAAGAAC 705627 Query 102165 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 102224 || |||| || ||| ||| ||||||| || || ||||||||||||||| Sbjct 705626 TCCA---CCTTCGCGACGCGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGC 705570 Query 102225 GGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283 || ||||| |||| | || | |||||||||||||| || |||||||| ||||| ||| Sbjct 705569 GGCTCCTT-TGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTTACCTT 705511 Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 |||||||||||| ||||||||||||||||| Sbjct 705510 CTCCAACGAGCTCATCTCTCGTGACGAGGG 705481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741926683920