Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 260 2e-64 seq5 114 2e-20 seq8 95.1 1e-14 >seq4 Length=3244807 Score = 260 bits (288), Expect = 2e-64 Identities = 1108/1725 (64%), Gaps = 49/1725 (3%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGAT--- 109556 ||||| ||||||||||||||||||||| |||||| ||||| | ||| | ||||| Sbjct 1907414 GTTCAGCGACTGAGACTGATCGATGAAGGCACCACGGTCAGCGGACATCTGAATGATGTT 1907473 Query 109557 ACACTTTTGGCTA-ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGT 109615 || || || | |||||||| || |||||||||| |||||| ||||||||||||| Sbjct 1907474 ACGCT----GCGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATCTCATCGGGAATGT 1907529 Query 109616 CCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACC 109675 |||| || || || |||||| | | || | | |||||| | | |||| Sbjct 1907530 TGGGGATGCGCTGGATGGAACCACCATCGGCGATGATTCGGTTCTTCATGTTGTCTGACC 1907589 Query 109676 AGAGACCGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCA 109731 |||| || | | ||||| | |||| | | | ||| |||| || | ||| Sbjct 1907590 AGAGGCCCATGTCGACAAGATCCTTGAGCAACCA-AGGGTTGACGACCTGGA---ACTCA 1907645 Query 109732 CCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTG 109791 ||||| | ||| || ||||||||| | |||||||| ||||| ||||| |||| Sbjct 1907646 CCAGCCAACACGCGACGAGAGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTAC 1907705 Query 109792 CCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGA 109851 || ||||| || | ||| || ||||| |||||||| |||| ||| | | ||| |||| | Sbjct 1907706 CCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCACGAGCAAAGAGTTGCGGACA 1907765 Query 109852 CCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAAT---TTA 109908 || | | | | ||| || | |||| || |||| || | | Sbjct 1907766 CCGTGCTGGGCAATCTTCTCCTTCAAAGACGCCCAGTC-------CCAC-AAGTCGGTGG 1907817 Query 109909 GTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAA 109968 | | || ||| |||| || ||| || | |||| || | ||||||| ||||| | | Sbjct 1907818 GGGTGACGTTCC-ACATGTCGTATTGGAGAATGCCCTGAGAAACAGGAGA-CCCTTCATA 1907875 Query 109969 C-TCTCGTACGACCCCTCAACCTCGGCCAACTCG---GATGAAGCCTCTAGTGCCGCATG 110024 ||||||||| || ||| ||||| ||| || |||| | | || || || Sbjct 1907876 TGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGACGAAGTC---AAAGCTGCGTG 1907932 Query 110025 ATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAG 110084 || || |||||||| || || || | || ||| | | ||||| || | Sbjct 1907933 GTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTCGGGAGATTCGAAAGGCAT 1907992 Query 110085 ACCACAAAGA-ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCT 110143 || | | ||| | || ||| || ||||| || ||||||||||| | ||| || ||| Sbjct 1907993 ACGA-AGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAGACCGACGGGCCGGTGCC 1908051 Query 110144 TCATGTTAGAGCGT-CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTG 110202 | | ||| | | | ||||| |||||||| |||| ||||||| | || Sbjct 1908052 TGAAGTT-GCTCTTACGAGCCTCCGGGACGGGGTAGTGGTTGACCTCGATGATCTTGTTC 1908110 Query 110203 AGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTC 110262 | || || ||| ||| |||| ||| || || || | | | || ||| || Sbjct 1908111 AAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGGAAGTCAAACACGCCATTC 1908170 Query 110263 TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCT 110322 | || | |||| | | ||||| || | ||| ||||||||||| || | |||||| Sbjct 1908171 TTCTCGTCGACAAACCTAGGGAGGGCGAGAGAGGCAAGATTGCATACGGCGACCTCGTCA 1908230 Query 110323 TTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTC 110382 | ||||||| || | || || || || | |||||| || || || | |||| Sbjct 1908231 GGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGGATAGTTCCGAGGTTC 1908290 Query 110383 TTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCC 110442 ||||| || ||| |||||| || ||||| ||||||||||| ||| | || || || Sbjct 1908291 TTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGTAGGGGTTTCCGGTCTCA 1908350 Query 110443 GTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAG 110501 ||||| | || ||| || || | ||| | | || | ||| ||| || | | | Sbjct 1908351 GTCTGAGCCTCGAGGATAGCATACCACAGCTTCTG-GGCACGGATGGTCTCACGTCCACG 1908409 Query 110502 ACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAG 110561 || || | |||||| ||| ||||| |||| || |||| ||||| ||||| | || Sbjct 1908410 GCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCTCACCGTAGACATCTGCGAG 1908469 Query 110562 ACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCAT 110621 ||| |||| | |||||| || || | ||| | ||| ||| | || | |||||| Sbjct 1908470 ACCAGGGGCCTCGCTGGGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCAT 1908529 Query 110622 GAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACC 110681 ||||||||| || | ||| | || |||| |||||||| ||| |||| || | || Sbjct 1908530 GAACAGGTCCGGTACCCAAAGAGCATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCC 1908589 Query 110682 TTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGAC 110741 ||||| || | || | ||| | | || | |||||| || || || |||| Sbjct 1908590 GTGGTTCTTTCGCAAGTCAAGGAAGCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGAT 1908649 Query 110742 AGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 |||| || ||| ||| || |||||| ||| || | || ||| ||| | Sbjct 1908650 GGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTA 1908709 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 ||| | ||||||||||| | || | ||| ||| || || || | || || Sbjct 1908710 GACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCC 1908769 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 ||||||||||| ||| | | || ||||||||| || || ||| || || Sbjct 1908770 GGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGCCAGCAGTCTTGGAGATCATGGC 1908829 Query 110919 ACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 ||| ||| | | || | || ||||| || || ||| |||| || | || || | Sbjct 1908830 GCACGTCT-TCAACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGA 1908888 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 ||||||| ||||| |||||| || || ||||||||||| ||||| || | || || Sbjct 1908889 AGCAAGACGACATTTGAGGAGACGGTGTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCG 1908948 Query 111038 TGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCG 111096 |||| | || | || |||||| ||| ||| || |||| || | ||| | ||| Sbjct 1908949 TGAAGA-ACTTCTGCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCG 1909007 Query 111097 TGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCA 111156 || || || | || || ||||| | ||| | || || ||| || ||| |||| Sbjct 1909008 TGGATGCCCACAGCTACACGCATCAGCATGTGCTGTGGACGCTCGGCTACCTTGCCATTG 1909067 Query 111157 ACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 | || ||||||| ||| |||||||||| |||||| || Sbjct 1909068 ATGCGGAGAAGGTATGATCGCTCCAGGGTCTTGAACCCAAAGAAT 1909112 >seq5 Length=3130344 Score = 114 bits (126), Expect = 2e-20 Identities = 334/503 (66%), Gaps = 21/503 (4%) Strand=Plus/Minus Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565 || || ||||| || || | ||||| | || || | |||| || || ||| |||| Sbjct 2367396 TCAAAGCGACCAGGTCGCATAAGAGCCTTGTCTAGGACATCGGGTCGATTGGTACCGGCC 2367337 Query 11566 ATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 | ||| || | || | ||| || | |||||||||||| ||||| || | ||| ||| Sbjct 2367336 AGGACAACCA--CCTG-CTCGGTGGTGTTGAAACCGTCCATCTCTGTAAGGATCTGATTG 2367280 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAG--GGCATACCACCTGCCGAACGCTTCTTA--CC 11678 | || |||||||||||||||| | | || | | |||| | | || | || Sbjct 2367279 AGTGTAGCTTCACGCTCATCGTTGCCGCCGCCAAAGTTCTTGCC-ACCTCTAGCTCGGCC 2367221 Query 11679 GACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAA 11738 | || || || || |||||||| | ||| || || | | | || | |||| Sbjct 2367220 AATGGCATCGATTTCGTCGATGAAGATGATGCAAGGCGTGCTCTTCCTGGCGTTGGCGAA 2367161 Query 11739 AAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA 11798 || || |||||||| || |||||||| || |||||||| || || | ||| | Sbjct 2367160 TAGATCTCGTACACGAGAAGCACCAACACCGACAAACATCTCGACAAACT---CGGAACC 2367104 Query 11799 AC--ACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 || || || | ||||||||| |||||| |||||| |||| ||||| || ||||| Sbjct 2367103 ACTGACGGAGAAGAAGGGAACCCCAGACTCTCCAGCGGTGGCCTTGGCGAGAAGTGTCTT 2367044 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCCA 11913 ||| |||||||| | || | | | || || ||||||||||||||||| |||| Sbjct 2367043 ACCAGTACCAGGGGGCCCGGACAAGATAGCTCCGCGGGGGATCTTGGCACCCAGCTTCTG 2366984 Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAG 11973 || |||| |||||| ||| | ||| || | ||| | ||||| |||||| Sbjct 2366983 AA--AGCGTGCAGGCTCCTTCAAGAACGAAACGAACTCGGTGATTTCCTGCTTGGCCTCA 2366926 Query 11974 TCGATACCCTCAACATCGGTGAA 11996 || || ||| |||| || | ||| Sbjct 2366925 TCCATGCCCGCAACGTCTGCGAA 2366903 >seq8 Length=2222996 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || || || |||||||||||||| || |||| ||| ||||||||||| || | ||| Sbjct 705481 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAGGCCACGCTTC 705540 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||||| ||| || |||||||| ||||| || |||||| Sbjct 705541 TTGAGCCAGAAGATGGACGCAAAGGAGCCGCTGAAGAAGATACCCTCGACGGCGGCGAAT 705600 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGCCCAGTT 119689 |||| |||||| || ||||| ||| |||||| || ||| |||||||||| Sbjct 705601 GCGATGAGACGCGTCGC-GAAGGTGGAGTTCTTGTCAGAGATCCATCGCAGAGCCCAGTC 705659 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGT 119716 |||||| || |||||||| || || Sbjct 705660 GGCCTTCTTCTTGATGCAGGGAACTGT 705686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975550905800