Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 253 2e-62 >seq4 Length=3244807 Score = 253 bits (280), Expect = 2e-62 Identities = 620/930 (67%), Gaps = 25/930 (3%) Strand=Plus/Plus Query 106388 GTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG 106447 || ||||||| |||| ||| ||||| || | | ||||| || | ||| || | | Sbjct 1908120 GTGACAATCTGAGTGACTTCGTGAAGCTTCTGGAAGTCAAACACGCCATTCTTCTCGTCG 1908179 Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 ||| || | || ||||||| || || | |||||| || || ||| || | ||| Sbjct 1908180 ACAAACCTAGGGAGGGCGAGAGAGGCAAGATTGCATACGGCGACCTCGTCAGGGGCGGTG 1908239 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | || || || || | |||||| || || || || | ||||| |||||| Sbjct 1908240 TACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTA 1908299 Query 106568 CTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAC 106627 ||||| |||||| || |||||||||||||||||||| | || ||||| ||||| | | Sbjct 1908300 CTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCC 1908359 Query 106628 TTGAGAATTGCCTTCCACA-CATCGG----CGGCTGGTACAATGGCGTTGGCCCGTCCCT 106682 | ||| || || | ||||| | || | ||| |||| | ||| | || |||| Sbjct 1908360 TCGAGGATAGCATACCACAGCTTCTGGGCACGGATGGT---CTCACGT--CCACGGCCCT 1908414 Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742 | || |||||| | | ||| || || || ||||||||||| | || | |||||| | Sbjct 1908415 CAGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCTCACCGTAGACATCTGCGAGACCAG 1908474 Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802 | |||| | ||||| || |||| ||| | ||| ||| | || ||||||||||| | Sbjct 1908475 GGGCCTCGCTGGGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACA 1908534 Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 106862 |||| || | ||| || | | || || || | || |||| || | || |||| Sbjct 1908535 GGTCCGGTACCCAAAGAGCATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGT 1908594 Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922 | ||| || |||||||| | | || |||||||| ||||| || |||| |||| Sbjct 1908595 TCTTTCGCAAGTCAAGGAAGCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGA 1908654 Query 106923 TAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 106976 | ||| ||||| ||| | || | || || | || ||| ||| | | Sbjct 1908655 AGGCACCC---GGACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGA 1908711 Query 106977 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG-TCCCCCGA-ATACGAGATTT 107034 | |||||||| ||||| | ||| | || ||| || | ||| |||| || ||| Sbjct 1908712 CACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAG--CC 1908769 Query 107035 ATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGC 107094 |||| | | || | || || |||||||| ||||| ||| ||||| || Sbjct 1908770 GGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGCCAGCAGTCTTGGAGATCATGGC 1908829 Query 107095 ACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAA 107154 ||| | | | || | |||||||| | ||| ||| ||||| || |||| ||||| Sbjct 1908830 GCACGTCTTCAACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAA 1908889 Query 107155 GCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAAT 107214 |||| ||||| || || |||||||| |||||||| || ||||| | ||||| | Sbjct 1908890 GCAAGACGACATTTGAGGAGACGGTGTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGT 1908949 Query 107215 GAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 107273 ||| | || | || |||||| ||||||| ||||| | | ||||| || || |||| Sbjct 1908950 GAAGA-ACTTCTGCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGT 1909008 Query 107274 GGATGCCGATGGCCACACGCATAAACATGT 107303 ||||||| | || |||||||| | ||||| Sbjct 1909009 GGATGCCCACAGCTACACGCATCAGCATGT 1909038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980350139640