Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 3e-26
seq11 91.5 3e-13
seq7 86.0 1e-11
>seq1
Length=5402283
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||||| || || ||||| ||||| |||| ||| || | || ||||| | |||
Sbjct 3267003 GTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCTTCCAACTG 3266944
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| ||||||||||| || || || || || |||||||| || || ||||||||||| ||
Sbjct 3266943 CTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCTTGAATCTT 3266884
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| ||||| || ||||| || || || ||||| ||||| | ||||| || ||
Sbjct 3266883 GGACTTCACGTTGTCGATGGTATCGGATGACTCGACTTCGAGGGTGATGGTCTTGCCGGT 3266824
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || || || || | |||||
Sbjct 3266823 CAACGTCTTGACAAAGATCTGCAT 3266800
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || |||||||| |||| ||| || | || ||||| | |||
Sbjct 3267231 GTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGCGTACGGCCGTCTTCCAACTG 3267172
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| ||||||||||| || || || ||||| || ||||||||||| ||||| || || ||
Sbjct 3267171 CTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTT 3267112
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || || || |||||||| || ||||| || || || | |||||| || ||
Sbjct 3267111 CGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAGTGTGATCGTCTTACCGGT 3267052
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| ||| || ||||| | |||||
Sbjct 3267051 GAGAGTCTTGACGAAAATCTGCAT 3267028
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || || || || || || |||||||| | || || | ||||| |||
Sbjct 3266497 ACGAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCCTCG 3266438
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| | ||||| ||||| || || ||||| || ||||| ||
Sbjct 3266437 AGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 3266378
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || |||||||| ||| ||||| || | ||| | |||||
Sbjct 3266377 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAGGTGATGGTCTTG 3266318
Query 195112 CCTGT 195116
|| ||
Sbjct 3266317 CCGGT 3266313
>seq11
Length=1384065
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||| |||| || || | || || ||||||||
Sbjct 1031235 GTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 1031294
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || ||||| || || |||||||| ||||| || || ||
Sbjct 1031295 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTT 1031354
Query 195057 TTGCTTGACGTTCTC 195071
|||||| || ||
Sbjct 1031355 GGACTTGACATTGTC 1031369
>seq7
Length=2328918
Score = 86.0 bits (94), Expect = 1e-11
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||| |||| || || | ||||| ||||||||
Sbjct 679338 GTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTG 679397
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||| || |||||||| || || || ||||| || ||||| || || ||||||
Sbjct 679398 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCT 679449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480732870787
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |