Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=5402283 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||| ||||||||||| ||||| ||||| | || | || ||| Sbjct 3267008 ACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCTTCC 3266949 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || || || || || || || ||||| || | || | ||||||||||| | Sbjct 3266948 AACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCTTGA 3266889 Query 34893 ATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| || ||| |||| ||||| | | ||| || |||| ||| |||| Sbjct 3266888 ATCTTGGACTTCACGTTGTCGATGGTATCGGAT-----GACTCGACTTCGAGGGTGATGG 3266834 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || | ||||| ||||||||||||||| Sbjct 3266833 TCTTGCCGGTCAACGTCTTGACAAAGATCTGCATA 3266799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633358655208