Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 2e-16
>seq1
Length=5402283
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 10/215 (5%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| ||| ||||||||||| ||||| ||||| | || | || |||
Sbjct 3267008 ACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCTTCC 3266949
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| ||| || || || || || || || ||||| || | || | ||||||||||| |
Sbjct 3266948 AACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCTTGA 3266889
Query 34893 ATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947
||||| || ||| |||| ||||| | | ||| || |||| ||| ||||
Sbjct 3266888 ATCTTGGACTTCACGTTGTCGATGGTATCGGAT-----GACTCGACTTCGAGGGTGATGG 3266834
Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || || || | ||||| |||||||||||||||
Sbjct 3266833 TCTTGCCGGTCAACGTCTTGACAAAGATCTGCATA 3266799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633358655208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |