Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq7 123 2e-23
>seq7
Length=2328918
Score = 123 bits (136), Expect = 2e-23
Identities = 442/683 (65%), Gaps = 46/683 (7%)
Strand=Plus/Plus
Query 29741 CCACCCTCCTGTT-TATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTC 29799
||| |||||| | |||| | || || |||||| || ||||||||||| ||||| |
Sbjct 1959948 CCAACCTCCTTATGTATCTTTAGCGTCGGAAAGTCCCTCGGCTCCCTCTCCAGCTGGACC 1960007
Query 29800 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCT 29859
|||| || || ||||| || | ||| ||||| || || |||| || || ||| |
Sbjct 1960008 TTCAACGCGTCGACGTGGTCGACGTACACGTGCGCATCGCCCATCGTATGCGTAAAAG-T 1960066
Query 29860 CCCGGTTCT-AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29918
||||| | || || ||||||||| ||||| || || || | ||||| |||||
Sbjct 1960067 CCCGGGCGTGAGATCGCACGCGTGAGCCAGCATGTGGGTTAGCAGCGCATAGCTCGCGAT 1960126
Query 29919 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAG----CTGA----CAC 29970
||| ||||| || || ||||||||||| | || |||||| || ||| |||
Sbjct 1960127 GTTGAAGGGGACGCCAAGCCCCATGTCGCAGCTCCGCTGGTAAAGGATACTGTGCAGCAC 1960186
Query 29971 GAGAG-----CTCTCCG---------TCGCT-----------CACGTAAAACTG---ACA 30002
| |||||| |||| |||||| || || | |
Sbjct 1960187 GCCCCTCTTCCTCTCCTCACCCTCTTTCGCCTGCGGAAACGACACGTAGAATTGCGCAAA 1960246
Query 30003 CATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACAC 30062
|||| ||||| || || || ||||| || ||| ||||||||| |||| |
Sbjct 1960247 CATG---TGGCAAGGCGGGAGCGCCATCTTCTTCAGGTCCGCGGGGTTCCACGCGCTGAG 1960303
Query 30063 GATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATC 30122
|||||||| | ||| | ||| |||||| | | || | | | | |||||| ||
Sbjct 1960304 TATGATGCGGCGGTCATATGGCTTGTTCTTCAGCTTATCAATGACCTCCGCCAGCTGGTC 1960363
Query 30123 CACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT-GTACTCTGCTCCGAAATGCCTCC 30181
|| ||| || | |||||| | || ||||| | |||||| || || || |||| ||
Sbjct 1960364 GACGCCCTGGCCGGTATAGTCTACA-TCGTGTCCCTTGTACTCGGCGCCAAAGTGCCGCC 1960422
Query 30182 ACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT-TG 30240
| ||||| || ||||| || || || || || || || |||| || ||||| | ||
Sbjct 1960423 ATTGGAAGCCATACACGGGCCCGAGATCGCCTTCCTCGTGGTGCGAGA-GCCCCACGCTG 1960481
Query 30241 TCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCT 30300
|| | | || | | ||||| ||||||||||||| | || || |||||
Sbjct 1960482 TCGAGGTACTCGCGGCTGCCGTTACCGTCCCAGATCTTGATGCCGGCGTCTGAGAGGGGC 1960541
Query 30301 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 30360
|| |||| |||| ||| ||| ||||| || || || | |||||||| | |||
Sbjct 1960542 TTCGAGTATGTGCTGCCTGCGACAAACCAGAGGAGTTCGGCTACGACGGCGCGCAGGAAG 1960601
Query 30361 ACCCTCTTGGTCGTGAGGAGGGG 30383
|| | ||| || |||||||||||
Sbjct 1960602 ACGCGCTTTGTGGTGAGGAGGGG 1960624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617296218353
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |