Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4 365 8e-96 seq8 235 1e-56 >seq4 Length=3244807 Score = 365 bits (404), Expect = 8e-96 Identities = 1274/1962 (65%), Gaps = 70/1962 (4%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| ||| |||||| |||| ||||| ||||||| || ||||| Sbjct 1907286 ACAGTGAACTGGATAGGAGCAGAGGCAGCCATGGTTCGTAGGTAGTACAATCCAGTCTTC 1907345 Query 212613 AGGCCCTTGCC-CCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTG 212671 || ||| || ||| ||| | |||||| | |||| |||| || | || Sbjct 1907346 AG-CCCAAGCTTCCAACCGGCAAAGTGCATGGACGTGA---TCTT--GCCCA------TG 1907393 Query 212672 GTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCT 212731 || | ||| | || ||| | |||||| |||||| ||| || ||||| | | | Sbjct 1907394 GT-AGGCTCCTT---CATATGAATGTTCAGCGACTGAGACTGATCGATGAAGGCACCACG 1907449 Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 |||||||| ||| | ||||| | | ||| |||| ||||| ||||||||| | | | Sbjct 1907450 GTCAGCGGACATCTGAATGATGTTACGCTGCGAGATTTCCCAAACGGTCTTGTACAGGGC 1907509 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAG 212848 |||| || || || | | ||||||| ||| | || || | | ||| | | Sbjct 1907510 CTTGATCTCATCGGGAATGTTGGGGATGCGCTGGATGGAACCACCATCGGCGATGATTCG 1907569 Query 212849 CTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGG 212908 | | ||||| || |||||||||| || | || ||||| || ||| Sbjct 1907570 GTTCTT---CATGTTGTCTGACCAGAGGCCCATGTCGACAAGATCCTTGAGCAACCAAGG 1907626 Query 212909 GTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGG 212968 |||||| | |||||| ||||| | | ||| | | ||| | ||| ||||||||||| Sbjct 1907627 GTTGACGACCTGGAACTCACCAGCCAACACGCGACGAGAGTAGATGTTGGAAGTGTAGGG 1907686 Query 212969 CTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCAC 213028 ||||| || |||||||| ||| || ||||| | ||| |||||| |||||||| ||||| Sbjct 1907687 CTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCAC 1907746 Query 213029 CAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC--CGAAGCTCTGCCCAGTCC 213086 || | | ||| | || ||||||| | | || | | ||| ||||||||| Sbjct 1907747 GAGCAAAGAGTTGCGGACACCGTGCTGGGCAATCTTCTCCTTCAAAGAC--GCCCAGTCC 1907804 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || || ||| | | |||||||||||||| | || | ||||| | Sbjct 1907805 CA---------CAAGTCGGTGGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGA 1907855 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 || || || | || | ||| || || ||||||||||||| ||||||||| Sbjct 1907856 GAAACAGGAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGAC 1907915 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 | || || |||| ||||||||| ||||| |||| ||||||| ||||| ||||| Sbjct 1907916 GAAGTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTCG 1907975 Query 213267 GGGGACGTGAAGGGCATCATCATGCGTT-GGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 || || ||| ||||| | | | | |||| |||||| || || || || |||| Sbjct 1907976 GGAGATTCGAAAGGCAT-ACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAG 1908034 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 |||| ||| | ||| || | ||| ||| |||| |||| | |||||| |||| Sbjct 1908035 ACCGACGGGCCGGTGCCTGAAGTTGCTCTTACGAGC-CTCCGGGACGGGGTAGTGGTTGA 1908093 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444 |||||||||||||| | |||||| ||| | | | ||||| | | || | || | Sbjct 1908094 CCTCGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGGA 1908153 Query 213445 GATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGC 213504 | |||||| | || | |||||| ||| ||||||| ||| || |||| Sbjct 1908154 AGTCAAACACGCCATTCTTCTCGTCGACAAACCTAGGGAGGGCGAGAGAGGCAAGATTGC 1908213 Query 213505 AAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATC 213564 | ||||| ||||| | || | | |||||||| |||||||| ||||| |||||| || | Sbjct 1908214 ATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGC 1908273 Query 213565 GGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCGTTGGCA-GAATCCTTGTAGAGCAT 213622 |||| || || ||||||| ||||| ||| ||||| | ||| | |||||||||||||| Sbjct 1908274 GGATAGTTCCGAGGTTCTTCTGGTT--ACTCTTGCGGTTGCAAGCGTCCTTGTAGAGCAT 1908331 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTT 213682 ||||||| |||||||| ||| | | | || || ||| || | | ||| Sbjct 1908332 GTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAGCTTCTGGGCACG 1908391 Query 213683 GACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATT 213741 || | || || | ||| | | ||| |||||| |||| || | | ||| | Sbjct 1908392 GATG----GTCTCACGTCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGAACT 1908447 Query 213742 CGTGGCCCCAGACC-CTGTCCAGTCCCGGACAGGAT-GC-GGGACACATGAGGCTCCAGT 213798 | | || |||| ||| | || || || | | || |||||| | || |||| | Sbjct 1908448 CCTCACCGTAGACATCTG-CGAGACCAGGG--GCCTCGCTGGGACAAAACAGAGTCCACT 1908504 Query 213799 CCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGT 213858 | || | ||| ||| | || ||||||||||||||| ||||| || || |||||||| Sbjct 1908505 CGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAACAGGT 1908564 Query 213859 CCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGT 213918 | | | | ||| ||| || ||| || |||| || || ||| ||| | || Sbjct 1908565 CACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACACGT 1908624 Query 213919 CCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGT 213975 | |||||||||||||||| ||||||||| ||||| |||| || | ||||| ||||||| Sbjct 1908625 CTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGT 1908684 Query 213976 CCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTC 214035 | || ||| || ||||| ||| || || | || | || |||||||| | Sbjct 1908685 CAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTAC 1908744 Query 214036 CGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGC 214095 |||||||||| | || || ||||||| ||| | | | | || | || || || | Sbjct 1908745 CGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATAC 1908804 Query 214096 CACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGC 214155 | || || |||||||||||||||||| | ||| || || ||| || | |||| Sbjct 1908805 CGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAGATACCCTCGATGC 1908864 Query 214156 TGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGT 214215 |||| || | | || | || |||||| ||| | || || | | || | | Sbjct 1908865 TGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGTGTACCCGCAT 1908924 Query 214216 TGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCA 214275 ||||||| || || || || | | ||||| | || | | ||||||||| | Sbjct 1908925 TGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGA 1908984 Query 214276 GGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGG 214335 | || || | |||||| | ||| | ||||||||||||||| | Sbjct 1908985 TAGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTG 1909044 Query 214336 GCCTCTCTATGGGTCCTTTGGGGCCCTT------GAGCAGGTAGGAGCGCTCCAGAGTCT 214389 | | ||| || | | || ||| || ||| ||||| || |||||||| |||| Sbjct 1909045 GACGCTC---GGCTACCTT---GCCATTGATGCGGAGAAGGTATGATCGCTCCAGGGTCT 1909098 Query 214390 TGAACCCAAAGTAGGAGTAGGTATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTCTT 214449 ||||||||||| | |||| | ||| ||| || | || | || ||||||| Sbjct 1909099 TGAACCCAAAGAATTGGTAGTTGAAGTCGCGGTCGTATACAATAGCCGAGTTGAGCTCTT 1909158 Query 214450 CCGCGTGCTCTTGGCTCAGCTTGAAAATCTCGTCCGAGATCA 214491 | ||||||| ||| | | ||| | | ||| ||||| |||| Sbjct 1909159 CGGCGTGCTTTTGTATGATGTTGTAGACCTCATCCGATATCA 1909200 >seq8 Length=2222996 Score = 235 bits (260), Expect = 1e-56 Identities = 365/517 (71%), Gaps = 11/517 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 705171 CTGGTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTCTC 705230 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAG--- 47955 ||||||| ||||||||||| | ||| || ||| || ||| | | |||| Sbjct 705231 CATGAAGTCGAAGGGGTTGGTCGCGTTGTAGACCTTGGTGTTGCCGA---GAGCCAGGAG 705287 Query 47956 CAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015 |||| | || |||||| |||||||||| | |||| || ||| ||||||||| | || Sbjct 705288 CAGGCGGTCGGCGACGAACTCGATGTACTGGCACATAAGAGTGGAGTTCATGCCGAGCAG 705347 Query 48016 GGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 || ||||| || | ||||| ||||||||||| || ||||| | | || Sbjct 705348 GGCGCAGGGCAGCGCGTCAGTGAGGAACTCCTTCTCGATGACAACGGCCTGGGTGATGAT 705407 Query 48076 CTGCTTAACGCGGGACTC-TGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 | | ||| | || | |||| || | ||| | || |||| | ||||| Sbjct 705408 ATCTTCGACGAGCTTCTTGTCAGGGCGGGTCTTG-AGGAG---GGAGAAGAGGAGGCAGG 705463 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||||| ||| ||||| || ||||||| ||||||||||| ||||||| Sbjct 705464 CGAAGTCAGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCAG 705523 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||||| || | || ||||||||||| || | ||| || ||||| ||||||||| | Sbjct 705524 GCATGAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCGCTGAAGAAGATAC 705583 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 |||| || || ||||| ||| |||| | | |||| | | ||||||||| ||||||| Sbjct 705584 CCTCGACGGCGGCGAATGCGATGAGACGCGTCGCGAAGGTGGAGTTCTTGTCAGAGATCC 705643 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 | || |||||||| ||||||||||||||||| || Sbjct 705644 ATCGCAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGG 705680 Score = 98.7 bits (108), Expect = 2e-15 Identities = 173/250 (69%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| ||||||||| | ||||| | Sbjct 705810 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGCGCCTCGGGGA 705869 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || ||| | ||||| ||| | || ||||| ||||| || || || || |||| Sbjct 705870 TCTGAACCTCTCCGCTGAATCGCTCGACCAAGTTCTCGTTGACGATACCGTCCGATGCAG 705929 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA-GAGC--ATTCC 48605 | |||||||||||||| ||| | ||| |||||||| || ||| | || |||| Sbjct 705930 CGAAGAAGGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGGCGCTTGTTCC 705989 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | || ||| ||| || | || || | ||||||||||| || || | Sbjct 705990 AGTCGTGCAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCCT 706049 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 706050 TCTTGTACAT 706059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532089706240