Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4 279 1e-69 seq8 163 5e-35 >seq4 Length=3244807 Score = 279 bits (308), Expect = 1e-69 Identities = 846/1287 (66%), Gaps = 49/1287 (4%) Strand=Plus/Plus Query 221353 AGACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGA 221412 ||| || ||| ||| || || | |||||| || ||| | | |||| || |||| || Sbjct 1907855 AGAAACAGGAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGA 1907914 Query 221413 CTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTC 221472 | |||| || |||||||||||||||||||||||| |||||||| |||| ||||| Sbjct 1907915 CGAAGTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTC 1907974 Query 221473 GGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGAT 221532 |||||| ||| |||||||| || | | ||| || || || || ||||| |||| Sbjct 1907975 GGGAGATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAG 1908034 Query 221533 ACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592 ||||| ||||| ||| || |||| || || || ||||| || |||||| Sbjct 1908035 ACCGACGGGCCGGTGCCTGAAGTTGCTCTTACGAGCCTCCGGGACGGGGTAGTGGTTGAC 1908094 Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652 ||||| | ||||| | ||| |||||| | | | || ||| ||||||||| Sbjct 1908095 CTCGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGG-- 1908152 Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAA---AGCGTTTAGGGCAAC 221709 || | ||| |||| | | | || ||||| || | ||||| | Sbjct 1908153 ----AAGTCAAACACGCCATTCTTCTCG------TCGACAAACCTAGGG---AGGGCGAG 1908199 Query 221710 GCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACA 221769 ||| || || || ||||| |||||||| | ||| |||| |||||||| || || Sbjct 1908200 AGAGGCAAGATTGCATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCA 1908259 Query 221770 GAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829 ||||||| || ||| || || |||| || || ||| |||||| ||| |||||| Sbjct 1908260 GAGGTTGGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTC 1908319 Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889 |||||||||||| |||| || ||||| ||||||| | || || | ||| || Sbjct 1908320 CTTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAG 1908379 Query 221890 TTCTCTGG-CGCTCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCGG--TAT 221945 | ||||| | | | ||| || | | | ||||| | ||| |||| || || Sbjct 1908380 CT-TCTGGGCACGGATGGTC-TCACGTCCACGGCCCTCAGC---TTCGTACCTGGCGTAC 1908434 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGC-GGGACAC 222004 ||||| | | |||| |||||||| | || | || || || ||| || |||||| Sbjct 1908435 AGAGCCT--CGAACTCCTCACCGTAGACATCTGCGAGACCAGGGG-CCTCGCTGGGACAA 1908491 Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 | |||| |||| | || |||| ||| | || |||||| |||||||| | ||| || Sbjct 1908492 AACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGA 1908551 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124 || | || || || | | || ||||||| ||||| ||| || | || || | Sbjct 1908552 GCATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGG 1908611 Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184 || ||| | ||| ||||||||||||||||| |||| ||| | || || || |||||| Sbjct 1908612 AAGCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTG 1908671 Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243 ||||||||||| || || ||| ||| | |||| ||| ||||| | || | || Sbjct 1908672 TTGCCACCCTGGTCAACGTACCT-AGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAG 1908730 Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC----TCAGGTTAC 222299 |||||||| ||||||||| || ||||| | ||| ||| | ||| || Sbjct 1908731 ACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCAC 1908790 Query 222300 TGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGT 222359 |||| || ||||| || || || |||||||||||||| |||| | |||| Sbjct 1908791 GTTCAGA----CCAATACCGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGT 1908846 Query 222360 CCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGA- 222418 | ||| ||||| || ||| ||||| | || | ||| || ||||||||||| ||| Sbjct 1908847 CGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAG 1908906 Query 222419 GATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 || ||| | || || || || || || || ||||| || ||| | | ||| Sbjct 1908907 GAGACGGT-GTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGAC 1908965 Query 222479 ATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCAT 222538 |||| ||||| ||||| | | | | || | || ||||| || || || Sbjct 1908966 ATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACA 1909025 Query 222539 CTCATGTACATGTACTGGGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTAC 222595 | ||| ||||| ||| || | || | || || ||| || ||||| ||||| Sbjct 1909026 CGCATCAGCATGTGCTGTGGACGCTCGGCTACCTTGCCATTGATGC-GGAGA--AGGTAT 1909082 Query 222596 GATTTTTCCAGAGTCTTGAACCCAAAG 222622 ||| ||||| ||||||||||||||| Sbjct 1909083 GATCGCTCCAGGGTCTTGAACCCAAAG 1909109 >seq8 Length=2222996 Score = 163 bits (180), Expect = 5e-35 Identities = 345/515 (67%), Gaps = 9/515 (2%) Strand=Plus/Minus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| ||||||||| |||||| ||||| || |||||| | ||| | | || Sbjct 705680 CCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGACAAGAACTCCACC 705621 Query 25870 TTTGGCGA-GCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928 || | ||| ||| || | || || || || || ||||| ||||| |||||||| || || Sbjct 705620 TTCG-CGACGCGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTT 705562 Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGA 25988 |||| ||||||||||||||||| || || |||||| || || ||| |||||||| Sbjct 705561 TGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCAACGA 705502 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA 26048 ||||||| | |||||||| | |||| || || |||||||| |||| | | || Sbjct 705501 GCTCATCTCTCGTGACGAGGGCATGCACACTGACTTCGCCTGCCTCCTCTTCTC---CCT 705445 Query 26049 CTTGCTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGA 26107 | | | || || | |||| || |||| | |||||||| |||| || | | Sbjct 705444 CCT-CAAGACCCGCCCTGACAAGAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCA 705386 Query 26108 TCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGAC 26167 ||||||||||||| | | ||||||||| || | Sbjct 705385 TCGAGAAGGAGTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCACTC 705326 Query 26168 TCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCC 26226 | ||| |||| ||||| |||| || ||||||| ||||| || | || || | || Sbjct 705325 TTATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGC-TCTCGGCAACACC 705267 Query 26227 AGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAG 26286 | |||||| || | ||||| |||||||| ||||| ||||| ||| | | || ||| Sbjct 705266 AAGGTCTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAG 705207 Query 26287 ACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 ||||||||||| || ||| | |||||||| || || Sbjct 705206 ACCAACTTCTTCGAGAAGCGCGTCGGCGATTACCA 705172 Score = 102 bits (112), Expect = 2e-16 Identities = 161/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 25480 TGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCC 25539 ||| | |||||||||||||| || || |||||||||||| ||||| |||||| || Sbjct 706065 TGGCAAATGTACAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATCGATCTGTCC 706006 Query 25540 AAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT---AC 25596 ||||| || ||| |||| || | ||| ||||| ||| || ||| | || Sbjct 706005 AAGGATCTGCACGACTGGAACAAGCGCCTCAATGACGACGAGCGCTTCTTCATCTCACAC 705946 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || | || ||||| || || || || ||||| || |||||||| || |||| ||||| Sbjct 705945 GTCCTTGCCTTCTTCGCTGCATCGGACGGTATCGTCAACGAGAACTTGGTCGAGCGATTC 705886 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 | | | || || ||| | ||||| || |||||||| |||||||| Sbjct 705885 AGCGGAGAGGTTCAGATCCCCGAGGCGCGATGCTTCTACGGCTTCCAGAT 705836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844091755840