Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq4 279 1e-69
seq8 163 5e-35
>seq4
Length=3244807
Score = 279 bits (308), Expect = 1e-69
Identities = 846/1287 (66%), Gaps = 49/1287 (4%)
Strand=Plus/Plus
Query 221353 AGACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGA 221412
||| || ||| ||| || || | |||||| || ||| | | |||| || |||| ||
Sbjct 1907855 AGAAACAGGAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGA 1907914
Query 221413 CTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTC 221472
| |||| || |||||||||||||||||||||||| |||||||| |||| |||||
Sbjct 1907915 CGAAGTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTC 1907974
Query 221473 GGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGAT 221532
|||||| ||| |||||||| || | | ||| || || || || ||||| ||||
Sbjct 1907975 GGGAGATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAG 1908034
Query 221533 ACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592
||||| ||||| ||| || |||| || || || ||||| || ||||||
Sbjct 1908035 ACCGACGGGCCGGTGCCTGAAGTTGCTCTTACGAGCCTCCGGGACGGGGTAGTGGTTGAC 1908094
Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652
||||| | ||||| | ||| |||||| | | | || ||| |||||||||
Sbjct 1908095 CTCGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGG-- 1908152
Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAA---AGCGTTTAGGGCAAC 221709
|| | ||| |||| | | | || ||||| || | ||||| |
Sbjct 1908153 ----AAGTCAAACACGCCATTCTTCTCG------TCGACAAACCTAGGG---AGGGCGAG 1908199
Query 221710 GCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACA 221769
||| || || || ||||| |||||||| | ||| |||| |||||||| || ||
Sbjct 1908200 AGAGGCAAGATTGCATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCA 1908259
Query 221770 GAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829
||||||| || ||| || || |||| || || ||| |||||| ||| ||||||
Sbjct 1908260 GAGGTTGGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTC 1908319
Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889
|||||||||||| |||| || ||||| ||||||| | || || | ||| ||
Sbjct 1908320 CTTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAG 1908379
Query 221890 TTCTCTGG-CGCTCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCGG--TAT 221945
| ||||| | | | ||| || | | | ||||| | ||| |||| || ||
Sbjct 1908380 CT-TCTGGGCACGGATGGTC-TCACGTCCACGGCCCTCAGC---TTCGTACCTGGCGTAC 1908434
Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGC-GGGACAC 222004
||||| | | |||| |||||||| | || | || || || ||| || ||||||
Sbjct 1908435 AGAGCCT--CGAACTCCTCACCGTAGACATCTGCGAGACCAGGGG-CCTCGCTGGGACAA 1908491
Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064
| |||| |||| | || |||| ||| | || |||||| |||||||| | ||| ||
Sbjct 1908492 AACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGA 1908551
Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124
|| | || || || | | || ||||||| ||||| ||| || | || || |
Sbjct 1908552 GCATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGG 1908611
Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184
|| ||| | ||| ||||||||||||||||| |||| ||| | || || || ||||||
Sbjct 1908612 AAGCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTG 1908671
Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243
||||||||||| || || ||| ||| | |||| ||| ||||| | || | ||
Sbjct 1908672 TTGCCACCCTGGTCAACGTACCT-AGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAG 1908730
Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC----TCAGGTTAC 222299
|||||||| ||||||||| || ||||| | ||| ||| | ||| ||
Sbjct 1908731 ACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCAC 1908790
Query 222300 TGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGT 222359
|||| || ||||| || || || |||||||||||||| |||| | ||||
Sbjct 1908791 GTTCAGA----CCAATACCGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGT 1908846
Query 222360 CCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGA- 222418
| ||| ||||| || ||| ||||| | || | ||| || ||||||||||| |||
Sbjct 1908847 CGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAG 1908906
Query 222419 GATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478
|| ||| | || || || || || || || ||||| || ||| | | |||
Sbjct 1908907 GAGACGGT-GTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGAC 1908965
Query 222479 ATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCAT 222538
|||| ||||| ||||| | | | | || | || ||||| || || ||
Sbjct 1908966 ATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACA 1909025
Query 222539 CTCATGTACATGTACTGGGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTAC 222595
| ||| ||||| ||| || | || | || || ||| || ||||| |||||
Sbjct 1909026 CGCATCAGCATGTGCTGTGGACGCTCGGCTACCTTGCCATTGATGC-GGAGA--AGGTAT 1909082
Query 222596 GATTTTTCCAGAGTCTTGAACCCAAAG 222622
||| ||||| |||||||||||||||
Sbjct 1909083 GATCGCTCCAGGGTCTTGAACCCAAAG 1909109
>seq8
Length=2222996
Score = 163 bits (180), Expect = 5e-35
Identities = 345/515 (67%), Gaps = 9/515 (2%)
Strand=Plus/Minus
Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869
||| ||||||||| |||||| ||||| || |||||| | ||| | | ||
Sbjct 705680 CCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGACAAGAACTCCACC 705621
Query 25870 TTTGGCGA-GCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928
|| | ||| ||| || | || || || || || ||||| ||||| |||||||| || ||
Sbjct 705620 TTCG-CGACGCGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTT 705562
Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGA 25988
|||| ||||||||||||||||| || || |||||| || || ||| ||||||||
Sbjct 705561 TGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCAACGA 705502
Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA 26048
||||||| | |||||||| | |||| || || |||||||| |||| | | ||
Sbjct 705501 GCTCATCTCTCGTGACGAGGGCATGCACACTGACTTCGCCTGCCTCCTCTTCTC---CCT 705445
Query 26049 CTTGCTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGA 26107
| | | || || | |||| || |||| | |||||||| |||| || | |
Sbjct 705444 CCT-CAAGACCCGCCCTGACAAGAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCA 705386
Query 26108 TCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGAC 26167
||||||||||||| | | ||||||||| || |
Sbjct 705385 TCGAGAAGGAGTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCACTC 705326
Query 26168 TCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCC 26226
| ||| |||| ||||| |||| || ||||||| ||||| || | || || | ||
Sbjct 705325 TTATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGC-TCTCGGCAACACC 705267
Query 26227 AGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAG 26286
| |||||| || | ||||| |||||||| ||||| ||||| ||| | | || |||
Sbjct 705266 AAGGTCTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAG 705207
Query 26287 ACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
||||||||||| || ||| | |||||||| || ||
Sbjct 705206 ACCAACTTCTTCGAGAAGCGCGTCGGCGATTACCA 705172
Score = 102 bits (112), Expect = 2e-16
Identities = 161/230 (70%), Gaps = 3/230 (1%)
Strand=Plus/Minus
Query 25480 TGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCC 25539
||| | |||||||||||||| || || |||||||||||| ||||| |||||| ||
Sbjct 706065 TGGCAAATGTACAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATCGATCTGTCC 706006
Query 25540 AAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT---AC 25596
||||| || ||| |||| || | ||| ||||| ||| || ||| | ||
Sbjct 706005 AAGGATCTGCACGACTGGAACAAGCGCCTCAATGACGACGAGCGCTTCTTCATCTCACAC 705946
Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656
|| | || ||||| || || || || ||||| || |||||||| || |||| |||||
Sbjct 705945 GTCCTTGCCTTCTTCGCTGCATCGGACGGTATCGTCAACGAGAACTTGGTCGAGCGATTC 705886
Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
| | | || || ||| | ||||| || |||||||| ||||||||
Sbjct 705885 AGCGGAGAGGTTCAGATCCCCGAGGCGCGATGCTTCTACGGCTTCCAGAT 705836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844091755840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |