Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq8 161 1e-33
seq4 145 9e-29
seq5 131 2e-24
seq7 89.7 6e-12
>seq8
Length=2222996
Score = 161 bits (178), Expect = 1e-33
Identities = 185/249 (74%), Gaps = 0/249 (0%)
Strand=Plus/Plus
Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743
|||| |||||| ||| ||||| |||||| |||||| |||||||||||||| | ||
Sbjct 705159 GACGCCCGCCTTCTGGTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAG 705218
Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803
|||||| |||||| | ||| ||||||| || |||||| ||| | |||||
Sbjct 705219 CGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTCGCGTTGTAGACCTTGGTGTTGCCGAG 705278
Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863
| | |||||||||||||||||| |||||||||||||||||||| || || ||||||
Sbjct 705279 AGCCAGGAGCAGGCGGTCGGCGACGAACTCGATGTACTGGCACATAAGAGTGGAGTTCAT 705338
Query 868864 GCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923
||||| || || ||||||| || | | ||||| |||||||| | |||||||
Sbjct 705339 GCCGAGCAGGGCGCAGGGCAGCGCGTCAGTGAGGAACTCCTTCTCGATGACAACGGCCTG 705398
Query 868924 GACGATGAT 868932
| ||||||
Sbjct 705399 GGTGATGAT 705407
Score = 111 bits (122), Expect = 2e-18
Identities = 145/196 (74%), Gaps = 11/196 (6%)
Strand=Plus/Plus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| ||||| ||| ||| | |||||| |||| || || ||||||||||| ||||||
Sbjct 705481 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAGGCCACGCTTC 705540
Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
|||||||| ||||||| |||| || ||| ||| ||||| |||||||||||||| ||
Sbjct 705541 TTGAGCCAGAAGATGGACGCA-AAGGAGCCGCTGAAGAAGATACCCTCGACGGCGGCGAA 705599
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355
||||||| ||| || |||||| ||| | ||||| |||||| || ||
Sbjct 705600 TGCGATGAGACGCGTCGCGAAGGTG--GAG----TTCTTGTCAGAGATCCATCGCAGAGC 705653
Query 869356 CCAGTCGGCCTTTTTC 869371
|||||||||||| |||
Sbjct 705654 CCAGTCGGCCTTCTTC 705669
Score = 105 bits (116), Expect = 8e-17
Identities = 176/254 (69%), Gaps = 3/254 (1%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || ||||||||||||||| ||| | | |||| | | ||
Sbjct 705815 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGCGCCTCGGGGATCTGA 705874
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
||||| |||| || || ||| ||||||| ||||| ||||| || |||||
Sbjct 705875 ACCTCTCCGCTGAATCGCTCGACCAAGTTCTCGTTGACGATACCGTCCGATGCAGCGAAG 705934
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA---GCGACACCCAGTGG 869809
|| || |||||||| ||| ||| |||||||||||| ||| || ||||| |
Sbjct 705935 AAGGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGGCGCTTGTTCCAGTCG 705994
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869
|| | || || | ||||||||||||||||| || || |||||||| |||
Sbjct 705995 TGCAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCCTTCTTG 706054
Query 869870 TACATCTCCCATAC 869883
||||| | ||| ||
Sbjct 706055 TACATTTGCCAGAC 706068
>seq4
Length=3244807
Score = 145 bits (160), Expect = 9e-29
Identities = 212/300 (71%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| ||||| | || |||| ||| |||| || ||||| || | ||| ||||||||
Sbjct 1908680 CTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGA 1908739
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||||| || | | ||| | ||||| ||| || | |||| || | ||
Sbjct 1908740 GGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCAGACC 1908799
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| ||||| || | ||||||||| | |||||| || | |||||||||||| |||||
Sbjct 1908800 AATACCGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAGATACCCTC 1908859
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| ||| |||||||||| | || ||||| ||||| |||| || || || ||
Sbjct 1908860 GATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGTGTACC 1908919
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|| ||||| || || |||| || ||||| |||| | ||||||| |||||||||
Sbjct 1908920 CGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGT 1908979
Score = 120 bits (132), Expect = 4e-21
Identities = 126/161 (78%), Gaps = 5/161 (3%)
Strand=Plus/Minus
Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAG--GCCTCG 19101
|||||||| || |||||||| |||||||| ||| || || |||| ||| | || |
Sbjct 2766543 GAGGACAGTATTGGCGGCACCGTGACGTGTGTGA-TCAGAAATTGCCC-CAGCGGACTAG 2766486
Query 19102 GCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGG 19161
| ||||||||||| ||||| | ||||| |||| || ||||||||||| || || |
Sbjct 2766485 GTGAGCCGTGCTTCGACAAACTGGAGGCGACGCTGGCACACGCCATGCTCAGCATACCTG 2766426
Query 19162 CCACCAAGGGATTCGAGATTGGCAGCGGGTTT-GCGGGTGC 19201
| |||||||| ||||||||||||||||||||| | ||||||
Sbjct 2766425 CTACCAAGGGCTTCGAGATTGGCAGCGGGTTTGGAGGGTGC 2766385
Score = 102 bits (112), Expect = 1e-15
Identities = 291/446 (65%), Gaps = 14/446 (3%)
Strand=Plus/Plus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCG-TCGTACCCAGGTTCTGCTGGTTG 1628220
||| || |||||| ||||| ||||||| | | | | || || ||||||| ||||||
Sbjct 1908241 ACTCGATGATCTCAGTGCAGAGGTTGGA-GCTGCGGATAGTTCCGAGGTTCTTCTGGTTA 1908299
Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280
| | ||||| |||||||||| |||||||||||| |||||||| |||| |||
Sbjct 1908300 CTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCC 1908359
Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACG-ACAGTC---CGCGCGCGGCCCTN 1628336
||| ||| || |||| | || | |||||| | ||| || | |||||||
Sbjct 1908360 TCGAGGATAGCATACCACAGCTTCTG----GGCACGGATGGTCTCACGTCCACGGCCCTC 1908415
Query 1628337 NNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGC-AGGCCGG 1628395
|| || || | |||||| || ||| || || |
Sbjct 1908416 AGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCTCACCGTAGACATC-TGCGAGACCAG 1908474
Query 1628396 GCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCG-CGCGGCGCATAAAG 1628454
| |||||| |||||||| || | ||| |||||| || | | || ||| ||
Sbjct 1908475 GGGCCTCGCTGGGACAAAACAGAGTCCACTCGCCATTC-TCTTGGACACGCTTCATGAAC 1908533
Query 1628455 AGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGG 1628514
||||| ||| || || || || ||||| ||||| || ||||||||||||||||
Sbjct 1908534 AGGTCCGGTACCCAAAGAGCATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGG 1908593
Query 1628515 TTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCA 1628574
|||||| | ||| || || | | ||| ||||||||||||||||||||| |||
Sbjct 1908594 TTCTTTCGCAAGTCAAGGAAGCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCG 1908653
Query 1628575 AAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
||||| ||| |||||| ||| ||
Sbjct 1908654 AAGGCACCCGGACGCTTGTTGCCACC 1908679
>seq5
Length=3130344
Score = 131 bits (144), Expect = 2e-24
Identities = 98/115 (85%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||||| |||||||||||||||||| | || ||||| | || |||||| |||||||||||
Sbjct 768229 GCCGCAAACTACCTCGACATCAAGGCCCTCCTCGACGTCGGCTGCAAGACTGTGGCCAAC 768170
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||||||||| ||||| |||||||| ||||| || ||||| || |||
Sbjct 768169 ATGATCAAGGGCAAGTCCCCCGACGAGATCCGGAAGACGTTCAACATTCAGAACG 768115
>seq7
Length=2328918
Score = 89.7 bits (98), Expect = 6e-12
Identities = 143/205 (70%), Gaps = 3/205 (1%)
Strand=Plus/Minus
Query 1852046 ATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGCTCTCGGTGAGGCCCGGCACGAGC 1852105
||||| ||| ||| ||||| |||||||||||||| | || | || || || || |
Sbjct 209901 ATCTTAGAGTCGGGGTCGCTTGCGCTCATCTTGCCACCCTGG---AGACCGGGTACCATG 209845
Query 1852106 GGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAG 1852165
||||| | || ||| |||| | ||||| | || || || ||| |
Sbjct 209844 GGGTTCATCAAGTGTGCACGCTCCTTGTAGCCAATCTTGGGAAGCACATCCTTCGCGAGC 209785
Query 1852166 GCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCG 1852225
|| || |||||||||||||| | || |||||||| | || ||||| | || ||||||
Sbjct 209784 GCGAAGATCTTGCGCTGGTCTAGTCCACCAAACTGCACATCTACGTCCAAGTACTGCTCA 209725
Query 1852226 TCGAGGGCCTGCATGAGCGGGTAGA 1852250
|| || |||||||| ||||||||||
Sbjct 209724 TCTAGCGCCTGCATAAGCGGGTAGA 209700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107134194054337
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