Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq15 96.9 3e-15
seq1 86.0 5e-12
>seq15
Length=916368
Score = 96.9 bits (106), Expect = 3e-15
Identities = 118/160 (74%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 34495 GGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554
||||| | |||| ||||| | || || |||||||||||| ||||||||||||||
Sbjct 176392 GGACGGTCGAGCGAGTTGGCAACGCTGGTCAGGTTGACGATGACGGTCTTGATGCCGTTA 176333
Query 34555 CCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614
||||| || || | ||||| ||||||| ||| |||||||||||||| | ||| |
Sbjct 176332 CCCTTGCCCTCAATCTTGGACTGGATGCGCTCCATCTTGTAGCGGTAGAAGGGGTCGGTA 176273
Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCATCGTGGCTGGTG 34654
|||| |||| ||||| | || |||| || || ||||
Sbjct 176272 ACATCGCGGCGGACGTTGATGGTGGCCATGGTTGC-GGTG 176234
>seq1
Length=5402283
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || |||||||| || || |||||||| ||||| ||| ||||| ||| | |
Sbjct 3266800 ATGCAGATCTTTGTCAAGACGTTGACCGGCAAGACCATCACCCTCGAAGTCGAGTCATCC 3266859
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | || || |||||| ||||| || || | || ||||||
Sbjct 3266860 GATACCATCGACAACGTGAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCAG 3266919
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | || || | || || || ||| |||| || | | | || | | || ||||||
Sbjct 3266920 CAGCGTCTCATCTTCGCAGGCAAGCAGTTGGAAGACGGCCGTACGCTTTCCGACTACAAC 3266979
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482
||||| || ||||| || ||||| |||||
Sbjct 3266980 ATTCAGAAGGAATCCACCCTGCACTTGGTG 3267009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841293078073
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |