Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq8 167 4e-35
seq5 127 3e-23
seq7 114 2e-19
seq4 98.7 2e-14
seq14 87.8 3e-11
>seq8
Length=2222996
Score = 167 bits (184), Expect = 4e-35
Identities = 187/250 (75%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
||||||||||||| || ||||| |||||| |||||| |||||||||||||| | |
Sbjct 705158 TGACGCCCGCCTTCTGGTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCAA 705217
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||||| |||||| | ||| ||||||| || |||| ||| | ||||
Sbjct 705218 GCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTCGCGTTGTAGACCTTGGTGTTGCCGA 705277
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | |||||||||||||||||||| || |||||||||||||| || | || |||||
Sbjct 705278 GAGCCAGGAGCAGGCGGTCGGCGACGAACTCGATGTACTGGCACATAAGAGTGGAGTTCA 705337
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||||| || || |||||||| || ||| ||||| |||||||| | |||||||
Sbjct 705338 TGCCGAGCAGGGCGCAGGGCAGCGCGTCAGTGAGGAACTCCTTCTCGATGACAACGGCCT 705397
Query 794131 CGATGATGAT 794140
| |||||||
Sbjct 705398 GGGTGATGAT 705407
Score = 91.5 bits (100), Expect = 2e-12
Identities = 144/206 (70%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
|||||||| | || ||||| |||| || || ||| |||||| ||||| |||
Sbjct 705860 GCCTCGGGGATCTGAACCTCTCCGCTGAATCGCTCGACCAAGTTCTCGTTGACGATACCG 705919
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG- 796268
|| || ||||| ||||| |||||||| ||| ||| ||||||||||| ||||
Sbjct 705920 TCCGATGCAGCGAAGAAGGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGG 705979
Query 796269 --CGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326
| | ||||| | | || | || |||| ||||||||||||||| |||||
Sbjct 705980 CGCTTGTTCCAGTCGTGCAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAGGAA 706039
Query 796327 GCCTCGGCCTTTTTGTACATCTCCCA 796352
|| |||||||| |||||||| | |||
Sbjct 706040 GCTTCGGCCTTCTTGTACATTTGCCA 706065
>seq5
Length=3130344
Score = 127 bits (140), Expect = 3e-23
Identities = 97/115 (84%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||||| |||||||||||||||||| |||||||||| | || |||||||| |||||||||
Sbjct 768229 GCCGCAAACTACCTCGACATCAAGGCCCTCCTCGACGTCGGCTGCAAGACTGTGGCCAAC 768170
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||||||||| ||||| || ||||| ||||| || ||||| || |||
Sbjct 768169 ATGATCAAGGGCAAGTCCCCCGACGAGATCCGGAAGACGTTCAACATTCAGAACG 768115
>seq7
Length=2328918
Score = 114 bits (126), Expect = 2e-19
Identities = 162/227 (71%), Gaps = 3/227 (1%)
Strand=Plus/Minus
Query 2411385 ATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCAC 2411444
||||||||| ||| ||| ||||| |||||||||||||| ||| | || || || ||
Sbjct 209905 ATCAATCTTAGAGTCGGGGTCGCTTGCGCTCATCTTGCCACCCTGG---AGACCGGGTAC 209849
Query 2411445 CAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGC 2411504
|| ||||| | || ||| |||| |||||| | | || || || |||
Sbjct 209848 CATGGGGTTCATCAAGTGTGCACGCTCCTTGTAGCCAATCTTGGGAAGCACATCCTTCGC 209789
Query 2411505 AAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTG 2411564
| || ||||||||||||||||| | || |||||||| | || ||||| | || |||
Sbjct 209788 GAGCGCGAAGATCTTGCGCTGGTCTAGTCCACCAAACTGCACATCTACGTCCAAGTACTG 209729
Query 2411565 CTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCG 2411611
||| || || |||||||| |||||||||| ||| ||||| ||||
Sbjct 209728 CTCATCTAGCGCCTGCATAAGCGGGTAGATGAGCCCACTGAGTGGCG 209682
>seq4
Length=3244807
Score = 98.7 bits (108), Expect = 2e-14
Identities = 294/451 (65%), Gaps = 24/451 (5%)
Strand=Plus/Plus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| || || ||| ||||| ||||||| | || | || || ||||||| ||||||
Sbjct 1908241 ACTCGATGATCTCAGTGCAGAGGTTGGAG--CTGCGGATAGTTCCGAGGTTCTTCTGGTT 1908298
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
|| | ||||| |||||||||| ||||||||||| || ||||| |||| ||
Sbjct 1908299 ACTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGC 1908358
Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCT 2071747
| || ||| || |||| | || |||||| || | ||| || |||||||
Sbjct 1908359 CTCGAGGATAGCATACCACA----GCTTCTGGGCACGGATGGTCTCACGTCCACGGCCCT 1908414
Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGC-AGGCCG 2071806
| || || || || | | |||| | || ||| || ||
Sbjct 1908415 CAGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCTCACCGTAGACATC-TGCGAGACCA 1908473
Query 2071807 GGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACC---ACGCGGCGCATA 2071863
|| |||||| || ||||| || | ||| ||||| | || | || || |||
Sbjct 1908474 GGGGCCTCGCTGGGACAAAACAGAGTCCACTCGCC---ATTCTCTTGGACACGCTTCATG 1908530
Query 2071864 AACAGGTC--GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGC 2071921
|||||||| | || ||| || | || || || || ||||| || |||||||||||
Sbjct 1908531 AACAGGTCCGGTAC--CCAAAGAGCATAGAACAGGTCACGCGCACGTACCTCCTCCTTGC 1908588
Query 2071922 CGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGC 2071981
||||||||||| || ||| || || | | ||| |||||||||||||||||||||
Sbjct 1908589 CGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGA 1908648
Query 2071982 AGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
||| ||||| ||| |||||| ||| ||
Sbjct 1908649 TGGCGAAGGCACCCGGACGCTTGTTGCCACC 1908679
>seq14
Length=943674
Score = 87.8 bits (96), Expect = 3e-11
Identities = 117/160 (73%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 1485546 GGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCG-GCCGG 1485604
||||||||||||||| | ||| ||| |||||| || ||| || || | |
Sbjct 688969 GGTCTGGATCTCGCGTGATGAGATGGTGGACTTCTTGTT-GTAGGCGGCAAGCTTGGAAG 689027
Query 1485605 CCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATT 1485664
|||||||| ||| ||| |||| ||||||||||| || ||||||| ||| ||||| |
Sbjct 689028 CCTCGGTGGCGACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCAAGATGGACATGGCAC 689087
Query 1485665 TGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
|||||| || || |||||||| ||||||||||| ||
Sbjct 689088 GGTTGGAAATACCAGTATCGGGGTGGACCTGCTTGAGGAC 689127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916239911151779
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |