Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 134 3e-26 >seq1 Length=5402283 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || |||||||| || ||||| ||||| || || || || | Sbjct 3267028 TACCGCCACGGAGACGAAGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGG 3266969 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | |||||||| | || || || || ||||| || | || ||||| |||| Sbjct 3266968 AAAGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAG 3266909 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||||||||| | || || || || || ||||| | || | Sbjct 3266908 GAATACCCTCCTTGTCTTGAATCTTGGACTTCACGTTGTCGATGGTATCGGATGACTCGA 3266849 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || |||||||| ||||||||||| ||||| |||||||| Sbjct 3266848 CTTCGAGGGTGATGGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826432640679