Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4 334 7e-87 seq8 163 3e-35 seq1 127 2e-24 seq11 95.1 1e-14 >seq4 Length=3244807 Score = 334 bits (370), Expect = 7e-87 Identities = 1146/1757 (65%), Gaps = 57/1757 (3%) Strand=Plus/Plus Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GT--CGCTT 148108 |||||| ||| || ||||| || ||||||||||||| ||| | ||||| || |||| Sbjct 1907420 CGACTGAGACTGATCGATGAAGGCACCACGGTCAGCGGACATCTGAATGATGTTACGCTG 1907479 Query 148109 TATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGAT 148168 | || ||||| | ||||||||||| |||||| | |||||||||| | ||| Sbjct 1907480 ---CGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATCTCATCGGGAATGTTGGGGAT 1907536 Query 148169 GCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTT 148228 |||||| | || || | | || | || | || ||| | ||| | | ||| Sbjct 1907537 GCGCTGGATGGAACCACCATCGGCGATGATTCGGTTCTTCATGTTGTCTGACCAGAGGCC 1907596 Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288 | |||| || || | || || | | || || ||||| ||||| || || | ||| Sbjct 1907597 CATGTCGACAAGATCCTTGAGCAACCAAGGGTTGACGACCTGGAACTCACCAGCCAACAC 1907656 Query 148289 GCGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCT 148347 ||| || ||| || | |||| || | || || || ||||||||| || | |||| Sbjct 1907657 GCGACG-AGAGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTACCCGAGGATCT 1907715 Query 148348 GCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTT 148407 ||| || | || || |||||| || || |||| |||||||| | |||| | | Sbjct 1907716 GCGAAGTAGAGGCTGTCGGCATGGGTGCCACGAGCAAAGAGTTGCGGACACCGTGCTGGG 1907775 Query 148408 TTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAG--CGGCGACGGTGTCACGTTCCACAT 148465 || || ||||| || |||||||||||| | ||| | |||| ||||||||||| Sbjct 1907776 CAATCTTCTCCTTCAAAGACGCCCAGTCCCACAAGTCGGTGGGGGTG--ACGTTCCACAT 1907833 Query 148466 GTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTG 148525 |||||| || |||||||| | | | || || || || | |||||||||| | Sbjct 1907834 GTCGTATTGGAGAATGCCCTGAGAAACAGGAGACCCTTCATATGTCTCGTACGGTCCGAG 1907893 Query 148526 CGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTG 148585 | || ||||| |||||| || | || ||| ||| || ||||| || || Sbjct 1907894 CTCCTTGGCCAGGTCGCAGGACGAAGTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTG 1907953 Query 148586 CCTGTTGAGCAGCGCCGCCGACTCGCT---TTCGTACGGCATACGCAGCCGCACAAACGC 148642 ||||||| | ||| ||| |||| | |||||||| || || || | Sbjct 1907954 GATGTTGAGTTTCTTAGCC---TCGGGAGATTCGAAAGGCATACGAAGAGACAGGAAGGT 1908010 Query 148643 GTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGC 148702 || ||||| || ||||| || | || | ||||||||| | | |||| || || Sbjct 1908011 ATCAGCAAGACCTTGTACACCGAGACCGACGGGCCGGTGCCTGAAGTTGCTCTTACGAGC 1908070 Query 148703 GCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCT 148761 | || || ||||||||| ||||||||||||| |||| ||||| || | || Sbjct 1908071 CTCCGGGACGGGGTAGTGGTTGACCTCGATGATCTTGTTCAAG-TTGCGAGTGACAATCT 1908129 Query 148762 TTGTAATTCTGCGCAGC------AATTCAAAATCG---TACTTGTCATCTACGATGCATC 148812 || | | | | ||| || ||||| || | ||| || || || | | Sbjct 1908130 GAGTGACTTCGTGAAGCTTCTGGAAGTCAAACACGCCATTCTTCTCGTCGACAAACCTAG 1908189 Query 148813 GGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTA 148872 || | ||||| |||||| |||||||| ||||| ||| || |||||| ||||||| | Sbjct 1908190 GG---AGGGCGAGAGAGGCAAGATTGCATACGGCGACCTCGTCAGGGGCGGTGTACTCGA 1908246 Query 148873 CGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGC 148932 |||||| | ||| || ||| || ||| || | |||||| || || ||||||| Sbjct 1908247 TGATCTCAGTGCAGAGGTTGGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTACTCTTGC 1908306 Query 148933 TGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTA 148992 |||||| ||||||||||| |||||||| || || || || ||| | || | | Sbjct 1908307 GGTTGCAAGCGTCCTTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGA 1908366 Query 148993 TGAACCGATG-CAGGTCCTGCGCGCGCACTTGCTGCTCGTAG-CGACCCTCCTGCTCGTA 149050 | | | | ||| | ||| || || | || | ||| || ||||| ||||| Sbjct 1908367 T-AGCATACCACAGCTTCTGGGCACGGATGGTCT-CACGTCCACGGCCCTCAGCTTCGTA 1908424 Query 149051 TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTG 149110 | ||||| ||||||| |||| |||||| ||| ||||||| ||| || | Sbjct 1908425 CCTGGCGTACAGAGCCTCGAACTCCTCACCGTAGACATCTGCGAGACCAGGGGCCTCGCT 1908484 Query 149111 CGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCAC 149170 || || | || | |||| |||| | | | | || |||||||| ||||| || || || Sbjct 1908485 GGGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTAC 1908544 Query 149171 CCAGAGCGCGTACATGAGGTCGCGCGC-CTTGCAGTCTTCGGCGCCCATGTTGCGGCGCA 149229 ||| || || || | ||||| ||||| | | | || || ||| ||| |||| Sbjct 1908545 CCAAAGAGCATAGAACAGGTCACGCGCACGTACC-TCCTCCTTGCCGTGGTTCTTTCGCA 1908603 Query 149230 GGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCT 149289 || || | ||| || | ||| |||||||||||||| | ||| | |||| || ||| Sbjct 1908604 AGTCAAGGAAGCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCG 1908663 Query 149290 TGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAG 149346 |||||| || |||||||| |||| | | ||||||| | || |||| ||||| Sbjct 1908664 GACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAG 1908723 Query 149347 GTTCAATGCCAC---TGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCA 149403 | |||| || ||| || ||||| || | ||| |||| || || | Sbjct 1908724 G---AATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAA 1908780 Query 149404 CTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GTCGCC 149461 ||||||||| | || || ||||| || || ||| ||||| ||||| ||| | Sbjct 1908781 TGCAGTGCACGTTCAGACCAATACCGCCAGCAGT-CTTGGAGATCATGGCGCACGTCTTC 1908839 Query 149462 GAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCA 149521 | ||| |||||| |||||||||||||| ||||||| | ||| ||||| || | Sbjct 1908840 AA-CGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGA 1908898 Query 149522 CATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTT 149581 |||||| ||| | | || || || ||| | || || ||||| || || | || Sbjct 1908899 CATTTGAGGAGACGGTGTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTT 1908958 Query 149582 CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTAT 149641 ||| |||||| ||||| | ||||| | || || || ||||| |||||||| | Sbjct 1908959 CTGCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCAC 1909018 Query 149642 GGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCA---ATTTTGAG 149698 || || ||||||||||| ||||| || ||||| || || ||| ||| || ||| Sbjct 1909019 AGCTACACGCATCAGCATGTGCTGTGGACGCTCGGCTACCTTG---CCATTGATGCGGAG 1909075 Query 149699 CAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTG 149758 | ||| || || |||||| | |||||| | | ||||| ||||||||| ||| Sbjct 1909076 AAGGTATGATCGCTCCAGGGTCTTGAACCCAAAGAATTGGTAGTTGAAGTCGCGGTCGTA 1909135 Query 149759 GTCAATGGCGGCGTCGA 149775 |||| || | || || Sbjct 1909136 TACAATAGCCGAGTTGA 1909152 >seq8 Length=2222996 Score = 163 bits (180), Expect = 3e-35 Identities = 345/510 (68%), Gaps = 21/510 (4%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| ||||||||||| ||||| || ||||| || ||||| | | ||| ||||| | Sbjct 705171 CTGGTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTCTC 705230 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| ||||||| || || | | ||| | | |||||| Sbjct 705231 CATGAAGTCGAAGGGGTTGGTCGCGTTGTAGACCTTGGTGTTGCCGAGAGCCAGGAGCAG 705290 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACAT-GGACTGCGCGTTCATGCCCAGCAACG 120529 ||||| || || ||||| ||||||| |||||| || || | ||||||||| |||| | Sbjct 705291 GCGGTCGGCGACGAACTCGATGTACTGGCACATAAGAGTG-GAGTTCATGCCGAGCAGGG 705349 Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACAT-- 120587 | |||| ||| |||| ||||||||||| ||| | || |||| ||| || Sbjct 705350 CGCAGGGCAGCGCGTCAGTGAGGAACTCCTTCTCGATGACAACGGCCTGGGTGATGATAT 705409 Query 120588 ----GGCGAGCATAGTGT--GGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAG 120641 | ||||| | ||| || |||| ||||| | || | | || || Sbjct 705410 CTTCGACGAGCTTCTTGTCAGGGCGGG--TCTTGAG---GAGG------GAGAAGAGGAG 705458 Query 120642 GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701 ||| || ||||| ||||||| ||||||||| || || || ||||||||| || || || Sbjct 705459 GCAGGCGAAGTCAGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAG 705518 Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 || ||||||| ||| | |||||| |||| |||| |||||| ||| ||||| Sbjct 705519 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCGCTGAAGAA 705578 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821 | ||||| ||| ||| || |||| | ||| || || || | ||||| Sbjct 705579 GATACCCTCGACGGCGGCGAATGCGATGAGACGCGTCGCGAAGGTGGAGTTCTTGTCAGA 705638 Query 120822 GATCCACTTCATGGCCCACTCGGCCTTTTT 120851 |||||| || ||||| |||||||| || Sbjct 705639 GATCCATCGCAGAGCCCAGTCGGCCTTCTT 705668 >seq1 Length=5402283 Score = 127 bits (140), Expect = 2e-24 Identities = 154/208 (74%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||| ||||| ||||| |||||||| ||| | ||| ||| ||| || | Sbjct 3267233 AAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGCGT--ACGGCCGTCTTCCA 3267176 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||||||| ||| | ||||| ||||||||||| || || |||||||||||||| || Sbjct 3267175 ACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGA 3267116 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||| | | || | ||||||| | |||||| || | |||| || || | Sbjct 3267115 TCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAGTGTGATCGTCTTAC 3267056 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||| || |||||||||||||| Sbjct 3267055 CGGTGAGAGTCTTGACGAAAATCTGCAT 3267028 Score = 109 bits (120), Expect = 5e-19 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || |||||||| || ||| ||| | ||||||||||||||||| Sbjct 3266485 GTCGATTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCA-TCCTCGAGCTGCTTGCC 3266427 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || |||||||| || |||||||| |||||||| |||||| ||| Sbjct 3266426 GGCGAAGATCAAGCGTTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 3266367 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | ||||||| | |||||| || | ||||| ||| |||||||| Sbjct 3266366 GACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAGGTGATGGTCTTGCCGGT 3266313 Score = 91.5 bits (100), Expect = 1e-13 Identities = 126/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| ||| | ||||| ||||||||||| Sbjct 3266768 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCA-TCCTCAAGCTGCTTGCC 3266710 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| ||||| || || ||||| || |||||| ||| Sbjct 3266709 GGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTATCCTGGATCTTCGACTT 3266650 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | |||| |||||| | | || || |||| || | ||| ||||| || Sbjct 3266649 GACGTTGTCAATCGTGTCAGACGATTCAACTTCGAGCGTAATGGTCTTGCCCGT 3266596 >seq11 Length=1384065 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| ||||| ||||| || ||||| ||| | ||| |||||||||| Sbjct 1031233 AAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGC 1031292 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || ||||||||||| || ||||||||||||||||| |||| Sbjct 1031293 TGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATC 1031352 Query 133575 TTTTGCTTGA 133584 || ||||| Sbjct 1031353 TTGGACTTGA 1031362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420431391640