Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 >seq1 Length=5402283 Score = 107 bits (118), Expect = 1e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | |||||| || || ||| || || || |||||||| ||||| || || || | Sbjct 3267015 ACGAAGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCC 3266956 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| ||||| || || || || || || | |||||||||||| | || | ||| || || Sbjct 3266955 GTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTT 3266896 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || ||| || | ||| | ||| ||| ||| || || || | |||| Sbjct 3266895 GTCTTGAATCTTGGACTTC-ACGTTGTCGATGGTATCGGATGACTCGACTTCGAGGGTGA 3266837 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || ||||| || ||||||||||||||| Sbjct 3266836 TGGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCATA 3266799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703755629120