Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 2e-16
>seq1
Length=5402283
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || |||||||| |||| ||||| || |||
Sbjct 3267031 CAGATTTTCGTCAAGACTCTCACCGGTAAGACGATCACACTGGAGGTGGAGTCATCCGAC 3267090
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || ||||| ||| |||||| ||
Sbjct 3267091 ACCATCGATAATGTGAAGTCGAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAGCAG 3267150
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || |||||||||||||| || | || | |||| ||||| ||
Sbjct 3267151 CGTCTCATCTTCGCAGGCAAGCAGTTGGAAGACGGCCGTACGCTTTCCGACTACAATATC 3267210
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| |||||||| || |||
Sbjct 3267211 CAGAAGGAGTCTACCCTGCAC 3267231
Score = 91.5 bits (100), Expect = 3e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || ||||| ||||| ||||| ||| ||||| |||| || |||
Sbjct 3266313 ACCGGCAAGACCATCACCTTGGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCC 3266372
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || || || || || ||||||| ||| | | ||||||||||| |||
Sbjct 3266373 AAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAACGCTTGATCTTCGCCGGCAAG 3266432
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| | || || | ||||||||| ||||||| || || || || |||
Sbjct 3266433 CAGCTCGAGGATGGTCGCACCCTGTCTGATTACAACATCCAGAAGGAATCGACGCTCCAC 3266492
Query 206374 CTTGT 206378
|| ||
Sbjct 3266493 CTCGT 3266497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819876333181
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |