Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 235 5e-57 >seq4 Length=3244807 Score = 235 bits (260), Expect = 5e-57 Identities = 987/1534 (64%), Gaps = 33/1534 (2%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951 ||||| || || ||||| || |||| ||| || | |||| || | ||| |||| | || Sbjct 1907628 TTGACGACCTGGAACTCACCAGCCAACACGCGAC-GAGAGTAGATGTTGGAAGTGTAGGG 1907686 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 ||| || |||| || | || | || || | || | || || |||||| ||||| Sbjct 1907687 CTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCAC 1907746 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGG--ATGTTGTCCTTCAAAGTTTGCCAGTCC 147069 | ||| || || || | ||||| || || || || |||||||||| ||||||| Sbjct 1907747 GAGCAAAGAGTTGCGGACACCGT--GCTGGGCAATCTTCTCCTTCAAAGACGCCCAGTCC 1907804 Query 147070 CACA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGG 147127 |||| ||| | ||| || ||||||||||||||||| ||||| | || || | | Sbjct 1907805 CACAAGTCG--GTGGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGAGAAACAG 1907862 Query 147128 GACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGA 147187 || || | | || ||| |||| || |||| || ||| | | Sbjct 1907863 GAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGACGAAGTCA 1907922 Query 147188 GCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCT 147247 ||| | | ||| ||||| || ||| || |||| || | || || | Sbjct 1907923 AAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTCGGGAGATT 1907982 Query 147248 CGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAG 147307 || |||||||||| ||| || |||| ||| || | ||| || | ||||| |||| | Sbjct 1907983 CGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAGACCGACGG 1908042 Query 147308 GTCGATGCTTTTCGTTGCTGCGCTT-CGCGCT--CGCTATGGGATAGTGGTTGCGATCAA 147364 | || ||| | |||||| ||| || || || | ||| ||||||||| || | Sbjct 1908043 GCCGGTGCCTGAAGTTGCT---CTTACGAGCCTCCGGGACGGGGTAGTGGTTGACCTCGA 1908099 Query 147365 TAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCAT 147424 | |||||||| | ||| || |||| | ||| | | | || |||| ||| ||| Sbjct 1908100 TGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGGAAGTCAA 1908159 Query 147425 A-AGTCCCGTCTTCGACACGT-ACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482 | | || ||||| || | | | || | ||||| ||| || |||||||| || Sbjct 1908160 ACACGCCATTCTTCTCGTCGACAAACCTAGGG--AGGGCGAGAGAGGCAAGATTGCATAC 1908217 Query 147483 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 ||| ||| || | | || |||||| | ||| || | ||| |||||| || || Sbjct 1908218 GGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGGAT 1908277 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 ||| | || | ||| || || || || ||||| ||||| ||| |||||||||| || Sbjct 1908278 AGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGTAGGG 1908337 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG-CAGGTCCTGCGCTCGCACCC 147661 |||||||| || | || | |||| | || ||| | ||| || || | Sbjct 1908338 GTTTCCGGTCTCAGTCTGAGCCTCGAGGATAG-CATACCACAGCTTCTGGGCACGGATGG 1908396 Query 147662 GCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGT 147721 || || |||||||| |||||||| |||||| ||| ||||| || |||| Sbjct 1908397 TCTCACGTCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCTCACCGT 1908456 Query 147722 AGCAATCGGCAAGGCCGGGACACT-GATGCGGACACATCAGCGACCACATGTCGTCCGCG 147780 || ||| || || || || || | || ||||| | ||| | |||| | | | | | Sbjct 1908457 AGACATCTGCGAGACCAGGGGCCTCGCTG-GGACAAAACAGAGTCCACTCGCCATTCTCT 1908515 Query 147781 TTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTG 147840 | || || ||| ||||| ||||| ||||| || || || | || || ||||| Sbjct 1908516 TGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAACAGGTCACGCGCACGT 1908575 Query 147841 CAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAG 147900 ||||| ||| ||| | ||| | ||| | |||| | | ||| |||||||| Sbjct 1908576 ACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACACGTCTGCGTGCCAC 1908635 Query 147901 GGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGC 147957 || || | ||||| ||| | ||||| |||||| || |||||||| || | | Sbjct 1908636 GGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTACCTA 1908695 Query 147958 ACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAA 148017 | ||||||| | || || | ||| || || ||| | | || |||||||| Sbjct 1908696 GCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTGGTTCCT 1908755 Query 148018 TTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GCCGTA 148076 ||| | |||| ||| || | ||||||||| | ||||| ||||| || || Sbjct 1908756 CCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGCCAGCAGT- 1908814 Query 148077 CTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGATGCTGTCGTTT 148134 ||| || || ||||| || | ||| || |||||| || ||||||||||| | Sbjct 1908815 CTTGGAGATCATGGCGCA--CGTCTTCAACGTGTCGTAGATACCCTCGATGCTGTCTTCC 1908872 Query 148135 TTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGG 148194 || | | | | || || || || ||||||| ||| | | || ||||| |||||| Sbjct 1908873 TTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGTGTACCCGCATTGAAAAGT 1908932 Query 148195 GTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCT 148254 || || |||||||| || || || || ||||||| || ||||| ||||| | Sbjct 1908933 GTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGATAGCCTTC 1908992 Query 148255 TCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCG 148314 || || || |||||||| ||||||| || || ||||| |||||||||||||| || ||| Sbjct 1908993 TCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTGGACGCTCG 1909052 Query 148315 GCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTAC 148374 || || | ||||| |||||| ||| || ||||| ||| | |||||| | Sbjct 1909053 GCTACCTTGCCATTGATGCGGAGAAGGTATGATCGCTCCAGGGTCTTGAACCCAAAGAAT 1909112 Query 148375 TTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 | ||| | || || | ||||| | || |||| Sbjct 1909113 TGGTAGTTGAAGTCGCGGTCGTATACAATAGCCG 1909146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610836583960