Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq4 235 5e-57
>seq4
Length=3244807
Score = 235 bits (260), Expect = 5e-57
Identities = 987/1534 (64%), Gaps = 33/1534 (2%)
Strand=Plus/Plus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951
||||| || || ||||| || |||| ||| || | |||| || | ||| |||| | ||
Sbjct 1907628 TTGACGACCTGGAACTCACCAGCCAACACGCGAC-GAGAGTAGATGTTGGAAGTGTAGGG 1907686
Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011
||| || |||| || | || | || || | || | || || |||||| |||||
Sbjct 1907687 CTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCAC 1907746
Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGG--ATGTTGTCCTTCAAAGTTTGCCAGTCC 147069
| ||| || || || | ||||| || || || || |||||||||| |||||||
Sbjct 1907747 GAGCAAAGAGTTGCGGACACCGT--GCTGGGCAATCTTCTCCTTCAAAGACGCCCAGTCC 1907804
Query 147070 CACA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGG 147127
|||| ||| | ||| || ||||||||||||||||| ||||| | || || | |
Sbjct 1907805 CACAAGTCG--GTGGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGAGAAACAG 1907862
Query 147128 GACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGA 147187
|| || | | || ||| |||| || |||| || ||| | |
Sbjct 1907863 GAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGACGAAGTCA 1907922
Query 147188 GCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCT 147247
||| | | ||| ||||| || ||| || |||| || | || || |
Sbjct 1907923 AAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTCGGGAGATT 1907982
Query 147248 CGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAG 147307
|| |||||||||| ||| || |||| ||| || | ||| || | ||||| |||| |
Sbjct 1907983 CGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAGACCGACGG 1908042
Query 147308 GTCGATGCTTTTCGTTGCTGCGCTT-CGCGCT--CGCTATGGGATAGTGGTTGCGATCAA 147364
| || ||| | |||||| ||| || || || | ||| ||||||||| || |
Sbjct 1908043 GCCGGTGCCTGAAGTTGCT---CTTACGAGCCTCCGGGACGGGGTAGTGGTTGACCTCGA 1908099
Query 147365 TAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCAT 147424
| |||||||| | ||| || |||| | ||| | | | || |||| ||| |||
Sbjct 1908100 TGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCTGGAAGTCAA 1908159
Query 147425 A-AGTCCCGTCTTCGACACGT-ACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482
| | || ||||| || | | | || | ||||| ||| || |||||||| ||
Sbjct 1908160 ACACGCCATTCTTCTCGTCGACAAACCTAGGG--AGGGCGAGAGAGGCAAGATTGCATAC 1908217
Query 147483 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542
||| ||| || | | || |||||| | ||| || | ||| |||||| || ||
Sbjct 1908218 GGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGGAT 1908277
Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
||| | || | ||| || || || || ||||| ||||| ||| |||||||||| ||
Sbjct 1908278 AGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGTAGGG 1908337
Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG-CAGGTCCTGCGCTCGCACCC 147661
|||||||| || | || | |||| | || ||| | ||| || || |
Sbjct 1908338 GTTTCCGGTCTCAGTCTGAGCCTCGAGGATAG-CATACCACAGCTTCTGGGCACGGATGG 1908396
Query 147662 GCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGT 147721
|| || |||||||| |||||||| |||||| ||| ||||| || ||||
Sbjct 1908397 TCTCACGTCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCTCACCGT 1908456
Query 147722 AGCAATCGGCAAGGCCGGGACACT-GATGCGGACACATCAGCGACCACATGTCGTCCGCG 147780
|| ||| || || || || || | || ||||| | ||| | |||| | | | | |
Sbjct 1908457 AGACATCTGCGAGACCAGGGGCCTCGCTG-GGACAAAACAGAGTCCACTCGCCATTCTCT 1908515
Query 147781 TTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTG 147840
| || || ||| ||||| ||||| ||||| || || || | || || |||||
Sbjct 1908516 TGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAACAGGTCACGCGCACGT 1908575
Query 147841 CAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAG 147900
||||| ||| ||| | ||| | ||| | |||| | | ||| ||||||||
Sbjct 1908576 ACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACACGTCTGCGTGCCAC 1908635
Query 147901 GGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGC 147957
|| || | ||||| ||| | ||||| |||||| || |||||||| || | |
Sbjct 1908636 GGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTACCTA 1908695
Query 147958 ACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAA 148017
| ||||||| | || || | ||| || || ||| | | || ||||||||
Sbjct 1908696 GCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTGGTTCCT 1908755
Query 148018 TTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GCCGTA 148076
||| | |||| ||| || | ||||||||| | ||||| ||||| || ||
Sbjct 1908756 CCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGCCAGCAGT- 1908814
Query 148077 CTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGATGCTGTCGTTT 148134
||| || || ||||| || | ||| || |||||| || ||||||||||| |
Sbjct 1908815 CTTGGAGATCATGGCGCA--CGTCTTCAACGTGTCGTAGATACCCTCGATGCTGTCTTCC 1908872
Query 148135 TTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGG 148194
|| | | | | || || || || ||||||| ||| | | || ||||| ||||||
Sbjct 1908873 TTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGTGTACCCGCATTGAAAAGT 1908932
Query 148195 GTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCT 148254
|| || |||||||| || || || || ||||||| || ||||| ||||| |
Sbjct 1908933 GTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGATAGCCTTC 1908992
Query 148255 TCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCG 148314
|| || || |||||||| ||||||| || || ||||| |||||||||||||| || |||
Sbjct 1908993 TCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTGGACGCTCG 1909052
Query 148315 GCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTAC 148374
|| || | ||||| |||||| ||| || ||||| ||| | |||||| |
Sbjct 1909053 GCTACCTTGCCATTGATGCGGAGAAGGTATGATCGCTCCAGGGTCTTGAACCCAAAGAAT 1909112
Query 148375 TTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
| ||| | || || | ||||| | || ||||
Sbjct 1909113 TGGTAGTTGAAGTCGCGGTCGTATACAATAGCCG 1909146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610836583960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |