Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq7 140 4e-28 >seq7 Length=2328918 Score = 140 bits (154), Expect = 4e-28 Identities = 429/665 (65%), Gaps = 35/665 (5%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||||| ||| | || ||| | || | ||| ||||||| | |||| | || ||| Sbjct 1959963 ATCTTTAGCGTCGGAAAGTCCCTCGGCTCCCTCTCCAGCTGGACCTTCAACGCGTCGACG 1960022 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| || ||| |||||||| || |||| || ||| ||| ||| ||| | || || Sbjct 1960023 TGGTCGACGTACACGTGCGCATCGCCCATCGTATGCGTAAAAGTCCCGGGCGTGAGATCG 1960082 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 | |||| |||| ||||| ||| ||||||| ||||| || |||||||||||||| || Sbjct 1960083 CACGCGTGAGCCAGCATGTGGGTTAGCAGCGCATAGCTCGCGATGTTGAAGGGGACGCCA 1960142 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAG----CTG----GCACG----------AGAGC 147093 || |||||||| | || |||||| || ||| ||||| | Sbjct 1960143 AGCCCCATGTCGCAGCTCCGCTGGTAAAGGATACTGTGCAGCACGCCCCTCTTCCTCTCC 1960202 Query 147094 TCCCCGTC---------------GGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGG 147137 || || || | |||||| || || ||| | |||||||| ||||| Sbjct 1960203 TCACCCTCTTTCGCCTGCGGAAACGACACGTAGAATTGCGCA-AACATGTGGCAAGGCGG 1960261 Query 147138 CAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTC 147197 |||||||| |||||||||||||||||| || || | | || | | | Sbjct 1960262 GAGCGCCATCTTCTTCAGGTCCGCGGGGTTCCACGCGCTGAGTATGATGCGGCGGTCATA 1960321 Query 147198 GGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTA 147257 || || |||| | || || || ||| | ||||||||| ||||||||||| || Sbjct 1960322 TGGCTTGTTCTTCAGCTTATCAATGACCTCCGCCAGCTGGTCGACGCCCTGGCCGGTATA 1960381 Query 147258 GTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGG 147317 || | || || |||| ||| |||||||||| ||| |||||||| ||||| || Sbjct 1960382 GTCTACATCGTGTCCCTTGTACTCGGCGCCAAAGTGCCGCCATTGGAAGCCATACACGGG 1960441 Query 147318 CCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCC 147377 ||| || ||||| || |||||||| ||| | | | ||| ||||| || || Sbjct 1960442 CCCGAGATCGCCTTCCTCGTGGTGCGAGAGCCCCACGCTGTCGAGGTACTCGCGGCTGCC 1960501 Query 147378 GTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCG 147437 || |||||||||| | || | | ||||| ||| |||| ||| ||| Sbjct 1960502 GTTACCGTCCCAGATCTTGATGCCGGCGTCTGAGAGGGGCTTCGAGTATGTGCTGCCTGC 1960561 Query 147438 GATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAG 147497 || |||||||| || || | | || | | | ||||| | ||| ||||| || || Sbjct 1960562 GACAAACCAGAGGAGTTCGGCTACGACGGCGCGCAGGAAGACGCGCTTTGTGGTGAGGAG 1960621 Query 147498 GGGGA 147502 ||||| Sbjct 1960622 GGGGA 1960626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487555090400