Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq8 147 3e-29 seq10 89.7 7e-12 seq4 87.8 3e-11 >seq8 Length=2222996 Score = 147 bits (162), Expect = 3e-29 Identities = 191/259 (74%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| | ||||||| | |||||||| ||||| ||| || ||||||| || Sbjct 705407 ATCATCACCCAGGCCGTTGTCATCGAGAAGGAGTTCCTCACTGACGCGCTGCCCTGCGCC 705348 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || ||||||||||| |||| || |||||||||||||| || || ||||||||||||| Sbjct 705347 CTGCTCGGCATGAACTCCACT-CTTATGTGCCAGTACATCGAGTTC-GTCGCCGACCGCC 705290 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 ||||| ||| |||||| | ||| |||| || ||||||| ||| | ||| Sbjct 705289 TGCTCCTGGCTCTCGGCAACACC-AAGGTCTACAACGCGACCAACCCCTTCGACTTCATG 705231 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 ||| |||||||| | |||||||||||||| |||||| ||||| ||||| ||| Sbjct 705230 GAGAACATCTCGCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGATTACCAG 705171 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| ||||||| |||| Sbjct 705170 AAGGCGGGCGTCATGGCCA 705152 Score = 136 bits (150), Expect = 6e-26 Identities = 205/288 (71%), Gaps = 5/288 (2%) Strand=Plus/Minus Query 1455779 TGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGG 1455838 ||| |||||||| || |||||||| || ||||| ||||||||||||||| |||| || Sbjct 706065 TGGCAAATGTAC-AAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATCGATCTGTC 706007 Query 1455839 CGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 | || | | ||||| || | | |||||||||||| |||||| || Sbjct 706006 CAAGGATCTGCACGACTGGAACAAGCGCCTCAATGACGACGAGCGCTTCTTCATCTCACA 705947 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 |||||| ||||| || ||| || || || ||||| ||||||| ||| || || | Sbjct 705946 CGTCCTTGCCTTCTT-CGCTGCATCGGACGGTATCGTCAACGAGAACTTGGTCGAGCGAT 705888 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 | | |||||| || | || ||||| || | || ||||| ||||||||| || | Sbjct 705887 TCAGCGGAGAGGTTCAGATCCCCGAGGCGCGATGCTTCTACGGCTTCCAGATCATGATGG 705828 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063 | ||||||||||| || || ||||| ||| |||||||||| ||| ||| Sbjct 705827 AGAACATCCACTCCGAGACATACTCCCTCTTGATCGACACATACATCA 705780 Score = 93.3 bits (102), Expect = 6e-13 Identities = 141/193 (73%), Gaps = 12/193 (6%) Strand=Plus/Minus Query 1456122 GAAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCC 1456178 ||| |||||||||||||| || |||||| ||||| | ||| || ||| || Sbjct 705669 GAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGACAAGAA----CTCCAC-CTTCGCG 705615 Query 1456179 GAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-C 1456236 ||| ||| ||| || ||||| |||||||| ||||| ||| ||| || |||| | Sbjct 705614 ACGCGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTT-TGCGTC 705556 Query 1456237 CATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTA 1456296 |||||| |||||||||||||| ||||||||||| |||||| ||| |||||| | | Sbjct 705555 CATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTT-ACCTTCTCCAACGAGCTCA 705497 Query 1456297 TCAGTCGCGACGA 1456309 || ||| ||||| Sbjct 705496 TCTCTCGTGACGA 705484 >seq10 Length=1424410 Score = 89.7 bits (98), Expect = 7e-12 Identities = 262/401 (65%), Gaps = 2/401 (0%) Strand=Plus/Plus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||||||| || || |||||||| | | | ||||| || || ||| |||||| | | Sbjct 818582 CGATTTGCGCATCTGTGAGGCGGGCGTATCTGAGGATAGCGCAGCGGGACTGCAGCGGTT 818641 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | | |||| |||||| || | || || ||||| || || | | | | Sbjct 818642 CGATGATCTTGTTCGACTGGTTGCAAGCAAAAGCGAATCGCGTGGTGCTGCTGTAGATCT 818701 Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026 |||| ||| || || |||||||| || | ||| | || || |||||||| | || Sbjct 818702 CCATTGTCCGTCGTAGCGCCTGTTGAGCTCCGCTCGTCATGCTATCCGCCTCGTCCAAGA 818761 Query 333027 TGATGATCTTGTGGC-GCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATG 333085 ||| | || || | ||||| | ||||| ||| | ||| ||| || || Sbjct 818762 TGACTAGTTTTTGCCTGCCCG-GAGGCAGCGTCACCTTCTTCTGCGCGAACCCCTTTATT 818820 Query 333086 ATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCG 333145 | || | || ||||| | ||||||||||| || || ||||| || || |||||||| Sbjct 818821 CTGTTCCTGACAACGTCTATACCGCGCTCGTCGGAAGCATTGAGCTCAAGTACGGCCTCC 818880 Query 333146 TCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTG 333205 | || |||| | || |||||| || || ||| || || || || || Sbjct 818881 TTATACGCATCACCGAGAAGCTGGCGCGCAAGACAAAGGATCGAGGTCGTTTTCCCAATG 818940 Query 333206 CCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTC 333246 |||||| |||| | | || || |||||||||||||| Sbjct 818941 CCGGGCATTCCCGATATTATGACGTGCGGCATGTTGCCGTC 818981 >seq4 Length=3244807 Score = 87.8 bits (96), Expect = 3e-11 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 262912 CAGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAG 262971 ||||| || | |||||||| ||||||||||| | |||||| || ||| | || |||||| Sbjct 1907773 CAGCACGGTGTCCGCAACTCTTTGCTCGTGGCACCCATGCCGACAGCCTCTACTTCGCAG 1907714 Query 262972 ATCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTG 263031 ||||| || ||| |||| |||||| | ||| |||||||||| | || |||||| Sbjct 1907713 ATCCTCGGGTACAACGAGTGCTTCGAGCCCTACACTTCCAACATCTACTCTCGTCGCGTG 1907654 Query 263032 CTCTCGGGCGACTTTACCGTGGTCAACC 263059 | | || || || || ||||||| Sbjct 1907653 TTGGCTGGTGAGTTCCAGGTCGTCAACC 1907626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177805316437882