Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq8 147 3e-29
seq10 89.7 7e-12
seq4 87.8 3e-11
>seq8
Length=2222996
Score = 147 bits (162), Expect = 3e-29
Identities = 191/259 (74%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| | ||||||| | |||||||| ||||| ||| || ||||||| ||
Sbjct 705407 ATCATCACCCAGGCCGTTGTCATCGAGAAGGAGTTCCTCACTGACGCGCTGCCCTGCGCC 705348
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| ||||||||||| |||| || |||||||||||||| || || |||||||||||||
Sbjct 705347 CTGCTCGGCATGAACTCCACT-CTTATGTGCCAGTACATCGAGTTC-GTCGCCGACCGCC 705290
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
||||| ||| |||||| | ||| |||| || ||||||| ||| | |||
Sbjct 705289 TGCTCCTGGCTCTCGGCAACACC-AAGGTCTACAACGCGACCAACCCCTTCGACTTCATG 705231
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
||| |||||||| | |||||||||||||| |||||| ||||| ||||| |||
Sbjct 705230 GAGAACATCTCGCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGATTACCAG 705171
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
||||| ||||||| ||||
Sbjct 705170 AAGGCGGGCGTCATGGCCA 705152
Score = 136 bits (150), Expect = 6e-26
Identities = 205/288 (71%), Gaps = 5/288 (2%)
Strand=Plus/Minus
Query 1455779 TGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGG 1455838
||| |||||||| || |||||||| || ||||| ||||||||||||||| |||| ||
Sbjct 706065 TGGCAAATGTAC-AAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATCGATCTGTC 706007
Query 1455839 CGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895
| || | | ||||| || | | |||||||||||| |||||| ||
Sbjct 706006 CAAGGATCTGCACGACTGGAACAAGCGCCTCAATGACGACGAGCGCTTCTTCATCTCACA 705947
Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955
|||||| ||||| || ||| || || || ||||| ||||||| ||| || || |
Sbjct 705946 CGTCCTTGCCTTCTT-CGCTGCATCGGACGGTATCGTCAACGAGAACTTGGTCGAGCGAT 705888
Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015
| | |||||| || | || ||||| || | || ||||| ||||||||| || |
Sbjct 705887 TCAGCGGAGAGGTTCAGATCCCCGAGGCGCGATGCTTCTACGGCTTCCAGATCATGATGG 705828
Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063
| ||||||||||| || || ||||| ||| |||||||||| ||| |||
Sbjct 705827 AGAACATCCACTCCGAGACATACTCCCTCTTGATCGACACATACATCA 705780
Score = 93.3 bits (102), Expect = 6e-13
Identities = 141/193 (73%), Gaps = 12/193 (6%)
Strand=Plus/Minus
Query 1456122 GAAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCC 1456178
||| |||||||||||||| || |||||| ||||| | ||| || ||| ||
Sbjct 705669 GAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGACAAGAA----CTCCAC-CTTCGCG 705615
Query 1456179 GAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-C 1456236
||| ||| ||| || ||||| |||||||| ||||| ||| ||| || |||| |
Sbjct 705614 ACGCGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTT-TGCGTC 705556
Query 1456237 CATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTA 1456296
|||||| |||||||||||||| ||||||||||| |||||| ||| |||||| | |
Sbjct 705555 CATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTT-ACCTTCTCCAACGAGCTCA 705497
Query 1456297 TCAGTCGCGACGA 1456309
|| ||| |||||
Sbjct 705496 TCTCTCGTGACGA 705484
>seq10
Length=1424410
Score = 89.7 bits (98), Expect = 7e-12
Identities = 262/401 (65%), Gaps = 2/401 (0%)
Strand=Plus/Plus
Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906
||||||| || || |||||||| | | | ||||| || || ||| |||||| | |
Sbjct 818582 CGATTTGCGCATCTGTGAGGCGGGCGTATCTGAGGATAGCGCAGCGGGACTGCAGCGGTT 818641
Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966
|||||| | | |||| |||||| || | || || ||||| || || | | | |
Sbjct 818642 CGATGATCTTGTTCGACTGGTTGCAAGCAAAAGCGAATCGCGTGGTGCTGCTGTAGATCT 818701
Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026
|||| ||| || || |||||||| || | ||| | || || |||||||| | ||
Sbjct 818702 CCATTGTCCGTCGTAGCGCCTGTTGAGCTCCGCTCGTCATGCTATCCGCCTCGTCCAAGA 818761
Query 333027 TGATGATCTTGTGGC-GCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATG 333085
||| | || || | ||||| | ||||| ||| | ||| ||| || ||
Sbjct 818762 TGACTAGTTTTTGCCTGCCCG-GAGGCAGCGTCACCTTCTTCTGCGCGAACCCCTTTATT 818820
Query 333086 ATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCG 333145
| || | || ||||| | ||||||||||| || || ||||| || || ||||||||
Sbjct 818821 CTGTTCCTGACAACGTCTATACCGCGCTCGTCGGAAGCATTGAGCTCAAGTACGGCCTCC 818880
Query 333146 TCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTG 333205
| || |||| | || |||||| || || ||| || || || || ||
Sbjct 818881 TTATACGCATCACCGAGAAGCTGGCGCGCAAGACAAAGGATCGAGGTCGTTTTCCCAATG 818940
Query 333206 CCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTC 333246
|||||| |||| | | || || ||||||||||||||
Sbjct 818941 CCGGGCATTCCCGATATTATGACGTGCGGCATGTTGCCGTC 818981
>seq4
Length=3244807
Score = 87.8 bits (96), Expect = 3e-11
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 262912 CAGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAG 262971
||||| || | |||||||| ||||||||||| | |||||| || ||| | || ||||||
Sbjct 1907773 CAGCACGGTGTCCGCAACTCTTTGCTCGTGGCACCCATGCCGACAGCCTCTACTTCGCAG 1907714
Query 262972 ATCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTG 263031
||||| || ||| |||| |||||| | ||| |||||||||| | || ||||||
Sbjct 1907713 ATCCTCGGGTACAACGAGTGCTTCGAGCCCTACACTTCCAACATCTACTCTCGTCGCGTG 1907654
Query 263032 CTCTCGGGCGACTTTACCGTGGTCAACC 263059
| | || || || || |||||||
Sbjct 1907653 TTGGCTGGTGAGTTCCAGGTCGTCAACC 1907626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177805316437882
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |