Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 122 8e-23 seq11 82.4 7e-11 >seq1 Length=5402283 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| || || ||||| |||| | || || |||| || Sbjct 3267237 CACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGCGTACGGCCGTCTTC 3267178 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || |||||| || || || || | ||||||||||||| |||| || ||||||||| Sbjct 3267177 CAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTG 3267118 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||||| | | | | |||||| || |||||||||| |||||||| || Sbjct 3267117 GATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAGTGTGATCGTCTT 3267058 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || | ||| || || || |||||||| Sbjct 3267057 ACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028 Score = 113 bits (124), Expect = 4e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || || | ||| | ||| |||||| ||||||||||| |||| | Sbjct 3266798 CCACCACGGAGGCGCAGGACGAGATGGAGTGTAGACTCCTTCTGAATGTTGTAGTCGGAC 3266739 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || ||||| ||||||||||||| |||| Sbjct 3266738 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGAGGA 3266679 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||| ||| |||||| ||| | |||| | | |||||| |||||| || Sbjct 3266678 ATACCCTCCTTATCCTGGATCTTCGACTTGA-CGTTGTCAATCGTGTCAGACGATTCAAC 3266620 Query 35689 CTCCACCGTGATCGTTTTACCCGT 35712 || | ||| || || || ||||| Sbjct 3266619 TTCGAGCGTAATGGTCTTGCCCGT 3266596 Score = 98.7 bits (108), Expect = 9e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||||||||| | || ||| || | || || |||||||| || || || Sbjct 3266479 TCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAG 3266420 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| || |||||||||| || | || |||||||||| |||||| ||| | | | Sbjct 3266419 ATCAAGCGTTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 3266360 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | |||||| || |||||||||| ||||| || || || || Sbjct 3266359 TCGATGGTGTCGGAAGACTCCACCTCCAAGGTGATGGTCTTGCCGGT 3266313 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||||||||| |||| | || || |||| |||| |||||| || || || Sbjct 3266990 TCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAG 3266931 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | |||||||| |||| ||||| | ||||||||| ||||| ||||| ||| Sbjct 3266930 ATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCTTGAATCTTGGACTTCA-CGTT 3266872 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || ||| || || || || | ||||| || || || ||||| || || || Sbjct 3266871 GTCGATGGTATCGGATGACTCGACTTCGAGGGTGATGGTCTTGCCGGTCAACGTCTTGAC 3266812 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 3266811 AAAGATCTGCAT 3266800 >seq11 Length=1384065 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || |||| || |||||||| || || || Sbjct 1031247 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1031306 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 |||| ||||||||||||| || | || ||||||||| |||||| Sbjct 1031307 GATCAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTT 1031354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793256269880