Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4 141 9e-29
seq1 125 7e-24
seq11 86.0 6e-12
>seq4
Length=3244807
Score = 141 bits (156), Expect = 9e-29
Identities = 286/421 (68%), Gaps = 5/421 (1%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
|| ||||||||| |||| || || |||||||| |||||||| || ||||| || |
Sbjct 1909042 CAGCACATGCTGATGCGTGTAGCTGTGGGCATCCACGGCGAGGATATTGAGAAGGCTATC 1908983
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
|| || ||| | |||||||| ||| || |||||||||||||| || | ||
Sbjct 1908982 GAGACCTACGACATGATGTCGCAGAAGTTCTTCACGCACGCTTCGCCAACACTTTTCAAT 1908923
Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743
||||| ||| | |||||| |||| || || || || | |||| |||||||||
Sbjct 1908922 GCGGGTACACCGTCTCCTCAAATGTCGTCTTGCTTCCTGATCGACATGAAGGAAGACAGC 1908863
Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGCGG 7802
||||| || || ||| ||||| || ||||||| || ||||| || || |||||
Sbjct 1908862 ATCGAGGGTATCTACGACACGTTGAAGACGTGCGCCATGATCTCCAAG-ACTGCTGGCGG 1908804
Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862
|| ||||||||||| || | | || |||| ||| ||||| ||||||||
Sbjct 1908803 TATTGGTCTGAACGTGCACTGCATTCGTGCCACCGGCTCATACATCGGAGGAACCAACGG 1908744
Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922
| ||| |||| | || ||| | || || | ||| ||| | | | | || ||
Sbjct 1908743 TACCTCCAACGGTCTCATTCCTATGCTTCGTGTCTACAACAACACTGCTAGGTACGTTGA 1908684
Query 7923 CCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979
|||||| || ||||| || ||| |||||||| |||||||||||||||| ||
Sbjct 1908683 CCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTGGAGCCGTGGCACGCAGA 1908624
Query 7980 C 7980
|
Sbjct 1908623 C 1908623
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 8761 CAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCG-ATTTGAAACG 8819
||||||||||||||||| ||||| |||||| |||||| | ||| ||| ||||||
Sbjct 1907842 CAATACGACATGTGGAACGTCACCCCCACCGACTTGTGGGACTGG-GCGTCTTTGAAGGA 1907784
Query 8820 CAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCAC 8879
|| ||||| || |||| | ||||| || || | ||||| |||||| || ||| |
Sbjct 1907783 GAAGATTGCCCAGCACGGTGTCCGCAACTCTTTGCTCGTGGCACCCATGCCGACAGCCTC 1907724
Query 8880 GACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGT 8939
||| | || || | || ||||||| | ||| ||||| | ||| |||| | |||
Sbjct 1907723 TACTTCGCAGATCCTCGGGTACAACGAGTGCTTCGAGCCCTACACTTCCAACATCTACTC 1907664
Query 8940 GAGACGAGTGTTGGCCGGCGATTT 8963
| || |||||||| || || ||
Sbjct 1907663 TCGTCGCGTGTTGGCTGGTGAGTT 1907640
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 8254 GAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGC 8313
|| ||||| | || |||||||| ||||| |||||||||||| ||| || || || |
Sbjct 1908349 GAGACCGGAAACCCCTACATGCTCTACAAGGACGCTTGCAACCGCAAGAGTAACCAGAAG 1908290
Query 8314 AACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCC 8373
||| | || || || | || ||| || ||| |||| || | |||||| ||| ||
Sbjct 1908289 AACCTCGGAACTATCCGCAGCTCCAACCTCTGCACTGAGATCATCGAGTACACCGCCCCT 1908230
Query 8374 GACGAAGTGGCCGTTTGCAATCTAGCGTC 8402
||||| || ||||| |||||||| || ||
Sbjct 1908229 GACGAGGTCGCCGTATGCAATCTTGCCTC 1908201
>seq1
Length=5402283
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | ||| || ||||||||||| ||||||||||||||| |
Sbjct 3267026 CCGCCACGGAGACGAAGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAA 3266967
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || | ||| |||||||| || || | |||||||||||| || ||
Sbjct 3266966 AGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGA 3266907
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || |||||||| || || || ||| | || ||||| || || ||
Sbjct 3266906 ATACCCTCCTTGTCTTGAATCTTGGACTTCACGTTGTCGATGGTATCGGATGACTCGACT 3266847
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| || || || || || || |||||
Sbjct 3266846 TCGAGGGTGATGGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| |||| ||||| || || || || ||||| |||||||||||||||
Sbjct 3266798 CCACCACGGAGGCGCAGGACGAGATGGAGTGTAGACTCCTTCTGAATGTTGTAGTCGGAC 3266739
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || || ||||| ||||| || || ||||| |||||||| || || ||
Sbjct 3266738 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGAGGA 3266679
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | ||||| |||||||| ||
Sbjct 3266678 ATACCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCAGACGATTCAACT 3266619
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
||||| |||||||| || || ||
Sbjct 3266618 TCGAGCGTAATGGTCTTGCCCGT 3266596
>seq11
Length=1384065
Score = 86.0 bits (94), Expect = 6e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || ||||| || |||||||||||| | |||| | ||| ||||||||
Sbjct 1031235 GTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 1031294
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || |||| |||||||| || ||||| |||||||| || || || || ||
Sbjct 1031295 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTT 1031354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398014633720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |