Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 3e-14
>seq1
Length=5402283
Score = 93.3 bits (102), Expect = 3e-14
Identities = 251/379 (66%), Gaps = 10/379 (3%)
Strand=Plus/Plus
Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500
|| || ||||| | | || ||||| || |||||||| ||||| ||| | || ||
Sbjct 317831 AACGGCCCTGAGGTACTCAACAAATACGTCGGTCAATCCGAAGAGAATATCCGGAAGATG 317890
Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTCTTTGCACATTAT 19559
||||| ||||| || |||| | | || | |||||| | || |||| || ||
Sbjct 317891 TTTGCCGACGCCGA-GAAGGAGTACAAAGAGAAGGGCGATGAGAGCGGCCTGCATATCAT 317949
Query 19560 AATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAG------GTTCTGGTGTAAATGG 19613
|| | |||||| | || ||| | || |||||||||| ||||||||| | |||
Sbjct 317950 TATCTTCGATGAACTTGATGCAGTTTGCAAGCAAAGAGGTTCTAGTTCTGGTGGCACTGG 318009
Query 19614 AGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAA 19673
|| ||||| ||||| || || || ||||| || | |||||||| | ||||| ||
Sbjct 318010 TGTTGGTGACAGCGTTGTGAACCAGCTGCTGTCGAAGCTCGACGGTGTCGATCAACTAAA 318069
Query 19674 TAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGC-CTTATTAC 19732
|| || | |||| |||||||| || | |||| | || || || ||| || |
Sbjct 318070 CAACATCCTGCTTATCGGCATGACCAACCGTATGGATATGATCGATGAAGCTCTTCTT-C 318128
Query 19733 GACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGTGG 19792
| || ||||| | ||| | | || ||||| | ||||||||| ||| |||| |
Sbjct 318129 GTCCTGGTCGTCTTGAAGTCCACATGGAAATCTCGCTCCCCGATGAAGCTGGCCGTGCGC 318188
Query 19793 AAATTTTAAACATACATAC 19811
| ||| | || || || ||
Sbjct 318189 AGATTCTCAAGATTCACAC 318207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455704516305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |