Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 3e-14 >seq1 Length=5402283 Score = 93.3 bits (102), Expect = 3e-14 Identities = 251/379 (66%), Gaps = 10/379 (3%) Strand=Plus/Plus Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500 || || ||||| | | || ||||| || |||||||| ||||| ||| | || || Sbjct 317831 AACGGCCCTGAGGTACTCAACAAATACGTCGGTCAATCCGAAGAGAATATCCGGAAGATG 317890 Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTCTTTGCACATTAT 19559 ||||| ||||| || |||| | | || | |||||| | || |||| || || Sbjct 317891 TTTGCCGACGCCGA-GAAGGAGTACAAAGAGAAGGGCGATGAGAGCGGCCTGCATATCAT 317949 Query 19560 AATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAG------GTTCTGGTGTAAATGG 19613 || | |||||| | || ||| | || |||||||||| ||||||||| | ||| Sbjct 317950 TATCTTCGATGAACTTGATGCAGTTTGCAAGCAAAGAGGTTCTAGTTCTGGTGGCACTGG 318009 Query 19614 AGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAA 19673 || ||||| ||||| || || || ||||| || | |||||||| | ||||| || Sbjct 318010 TGTTGGTGACAGCGTTGTGAACCAGCTGCTGTCGAAGCTCGACGGTGTCGATCAACTAAA 318069 Query 19674 TAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGC-CTTATTAC 19732 || || | |||| |||||||| || | |||| | || || || ||| || | Sbjct 318070 CAACATCCTGCTTATCGGCATGACCAACCGTATGGATATGATCGATGAAGCTCTTCTT-C 318128 Query 19733 GACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGTGG 19792 | || ||||| | ||| | | || ||||| | ||||||||| ||| |||| | Sbjct 318129 GTCCTGGTCGTCTTGAAGTCCACATGGAAATCTCGCTCCCCGATGAAGCTGGCCGTGCGC 318188 Query 19793 AAATTTTAAACATACATAC 19811 | ||| | || || || || Sbjct 318189 AGATTCTCAAGATTCACAC 318207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455704516305