Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq4 248 1e-60
>seq4
Length=3244807
Score = 248 bits (274), Expect = 1e-60
Identities = 623/937 (66%), Gaps = 25/937 (3%)
Strand=Plus/Plus
Query 111161 GTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG 111220
|| ||||||| |||| ||| ||||| || | | ||||| || | ||| || | |
Sbjct 1908120 GTGACAATCTGAGTGACTTCGTGAAGCTTCTGGAAGTCAAACACGCCATTCTTCTCGTCG 1908179
Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280
||| || | || ||||||| || || | |||||| || || ||| || | |||
Sbjct 1908180 ACAAACCTAGGGAGGGCGAGAGAGGCAAGATTGCATACGGCGACCTCGTCAGGGGCGGTG 1908239
Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340
||||| | || || || || | |||||| || || || || | ||||| ||||||
Sbjct 1908240 TACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTA 1908299
Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAT 111400
||||| |||||| || |||||||||||||||||||| | || ||||| ||||| |
Sbjct 1908300 CTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCC 1908359
Query 111401 TTGAGAATAGCCTTCCA-AACATCGG----CGGCTGGTACAATGGCGTTGGCCCGTCCCT 111455
| ||| ||||| | ||| | | || | ||| |||| | ||| | || ||||
Sbjct 1908360 TCGAGGATAGCATACCACAGCTTCTGGGCACGGATGGT---CTCACGT--CCACGGCCCT 1908414
Query 111456 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515
| || |||||| | | ||| || || || ||||||||||| | || | |||||| |
Sbjct 1908415 CAGCTTCGTACCTGGCGTACAGAGCCTCGAACTCCTCACCGTAGACATCTGCGAGACCAG 1908474
Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575
| |||| | ||||| || |||| ||| | ||| || | || ||||||||||| |
Sbjct 1908475 GGGCCTCGCTGGGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACA 1908534
Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 111635
|||| || | ||| || | | || || || | || |||| || | || ||||
Sbjct 1908535 GGTCCGGTACCCAAAGAGCATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGT 1908594
Query 111636 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 111695
| ||| || |||||||| | | || |||||||| ||||| || |||| ||||
Sbjct 1908595 TCTTTCGCAAGTCAAGGAAGCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGA 1908654
Query 111696 TAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 111749
| ||| ||||| ||| | || | || || | || ||| ||| | |
Sbjct 1908655 AGGCACCC---GGACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGA 1908711
Query 111750 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG-TCCCCCGA-ATACGAGATTT 111807
| |||||||| ||||| | ||| | || ||| || | ||| |||| || |||
Sbjct 1908712 CACGAAGCATAGGAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAG--CC 1908769
Query 111808 ATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGC 111867
|||| | | || | || || |||||||| ||||| ||| ||||| ||
Sbjct 1908770 GGTGGCACGAATGCAGTGCACGTTCAGACCAATACCGCCAGCAGTCTTGGAGATCATGGC 1908829
Query 111868 ACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAA 111927
||| | | | || | |||||||| | ||| ||| ||||| || |||| |||||
Sbjct 1908830 GCACGTCTTCAACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAA 1908889
Query 111928 GCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAAT 111987
|||| ||||| || || |||||||| |||||||| || ||||| | ||||| |
Sbjct 1908890 GCAAGACGACATTTGAGGAGACGGTGTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGT 1908949
Query 111988 GAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 112046
||| | || | || |||||| ||||||| ||||| | | ||||| || || ||||
Sbjct 1908950 GAAGA-ACTTCTGCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGT 1909008
Query 112047 GGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
||||||| | || || ||||| | ||||| ||||||
Sbjct 1909009 GGATGCCCACAGCTACACGCATCAGCATGTGCTGTGG 1909045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031521125600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |