Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 309 4e-79 seq8 125 9e-24 >seq4 Length=3244807 Score = 309 bits (342), Expect = 4e-79 Identities = 1134/1749 (65%), Gaps = 49/1749 (3%) Strand=Plus/Plus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCA---GGCATACATA 117884 ||| | | ||| |||||||||| || ||||| ||||| ||||||| |||| | Sbjct 1907313 GCCATGGTTCGTAGGTAGTACAATCCAGTCTTCAGCCCAAGCTTCCAACCGGCAAAG--- 1907369 Query 117885 TGCATTGAGGACAACTTGGAGAGGGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGGG 117942 ||||| || | | |||| | ||| || ||| ||||| ||||| || | Sbjct 1907370 TGCATGGACGTGATCTTGCCCATGGTAGGCTCCTTCATATGAAT--GTTCAGCGACTGAG 1907427 Query 117943 ATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTT 118002 | |||||||||||| || || || || | ||| | ||| | | | | ||||| Sbjct 1907428 ACTGATCGATGAAGGCACCACGGTCAGCGGACATCTGAATGATGTTACGCTGCGAGATTT 1907487 Query 118003 CCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGG 118062 |||| || ||| |||| ||| ||| || ||||| || || | ||| ||||||| Sbjct 1907488 CCCAAACGGTCTTGTACAGGGCCTTGATCTCATCGGGAATGTTGGGGATGCGCTGGATGG 1907547 Query 118063 ATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGA 118122 | ||||| | || || | | |||||| | | ||||||||| || || | | Sbjct 1907548 AACCACCATCGGCGATGATTCGGTTCTTCATGTTGTCTGACCAGAGGCCCATGTCGACAA 1907607 Query 118123 GATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 118179 |||||| ||| | | ||||| || |||||||| || | ||| | | Sbjct 1907608 GATCCTT---GAGCAACCAAGGGTTGACGACCTGGAACTCACCAGCCAACACGCGACG-A 1907663 Query 118180 GA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTG 118238 || ||||| |||| ||||| ||||| |||||||| |||| || | ||| || | || Sbjct 1907664 GAGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTA 1907723 Query 118239 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 118298 |||||||| ||||||||||||| ||| | ||| |||| ||| | | ||| Sbjct 1907724 GAGGCTGTCGGCATGGGTGCCACGAGCAAAGAGTTGCGGACACCGTGCTGGGCAATCTTC 1907783 Query 118299 TCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGG 118358 ||||| | || ||||||| | | | | | | |||||| || | ||| Sbjct 1907784 TCCTTCAAAGACGCCCAGTCCCACAAGTCGGTGGGGGTGACGTTCCACATGTCGTATTGG 1907843 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 || || || || || | || || || ||| ||||||| || || || ||| ||| Sbjct 1907844 AGAATGCCCTGAGAAACAGGAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCC 1907903 Query 118419 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATT 118478 | ||| || || | |||||||| || || || ||||| || | || | | Sbjct 1907904 AGGTCGCAGGACGAAGTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGT 1907963 Query 118479 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 118538 ||| |||||| || || || | | || | | || ||| || |||||| Sbjct 1907964 TTCTTAGCCTCGGGAGATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCT 1908023 Query 118539 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACG 118595 || |||||||| || | || || || || | || ||| ||||| |||| ||| Sbjct 1908024 TGTACACCGAGACCGACGGGCCGGTGCCTGAAGTTGCTCTTACGAGC---CTCCGGGACG 1908080 Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655 || || || ||||| | | | || | || ||||||| || |||| ||| Sbjct 1908081 GGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCG 1908140 Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 118715 |||||||| | | | ||||| || | ||| || | |||| || |||| ||||||| Sbjct 1908141 TGAAGCTTCTGGAAGTCAAACACGCCATTCTTCTCGTCGACAAACCTAGGGAGGGCGAGA 1908200 Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775 || || ||||| || || | | ||| || | |||||||| || || || ||||| Sbjct 1908201 GAGGCAAGATTGCATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAG 1908260 Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835 | ||| || || || || || | |||||| || || ||| ||| || || ||| Sbjct 1908261 AGGTTGGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCC 1908320 Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 118894 ||||| |||||||| || | || ||||| || || | || ||| ||||| | ||| | | Sbjct 1908321 TTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAGC 1908380 Query 118895 ATC--GGCA--GCTGG-CACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949 || |||| | ||| | || ||| | || ||||| | |||||| | | ||| Sbjct 1908381 TTCTGGGCACGGATGGTCTCA----CGTC--CACGGCCCTCAGCTTCGTACCTGGCGTAC 1908434 Query 118950 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAA 119008 || || || ||||| ||||| | | |||| ||| || || |||| ||||| || || Sbjct 1908435 AGAGCCTCGAACTCCTCACCGTAGACATCTGCGAGACCAGGGGCCTCG-CTGGGACAAAA 1908493 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 |||| ||| | ||| ||| | || ||||||||||| ||||| || | ||| || || Sbjct 1908494 CAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGC 1908553 Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128 |||| || || || || | || || | || || || ||||| || | || Sbjct 1908554 ATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAA 1908613 Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA-- 119186 | | | || ||||||||||| |||||||| | |||| | ||| ||| Sbjct 1908614 GCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTT 1908673 Query 119187 -CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245 ||| |||||| || ||||| |||||| ||| | ||||||||||| ||||||| ||| Sbjct 1908674 GCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACC 1908733 Query 119246 ATCGGATTGGCCATTTGTCCC-CCGAA-TACGAGACTTATTGGCTCTGACATCGTGGATG 119303 | ||| || || || || |||| || ||| | |||| | | ||| | | Sbjct 1908734 GTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCCGG--TGGCACGAATGCAGTGCACG 1908791 Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363 | || ||||||||| || || ||| ||||| |||||| | | | || ||||| Sbjct 1908792 TTCAGACCAATACCGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAG 1908851 Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423 || || ||||| ||| |||| | |||| |||||||| |||||||||||| Sbjct 1908852 ATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGAC 1908911 Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 119482 |||||||| || ||||| || ||||| | ||||| |||| | || | || |||||| | Sbjct 1908912 GGTGTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGA-ACTTCTGCGACATCAT 1908970 Query 119483 GTCGTAGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 119541 |||||||||||| | || | | ||| || || ||||| || || | | || |||| Sbjct 1908971 GTCGTAGGTCTCGATAGCCTTC-TCAATATCCTCGCCGTGGATGCCCACAGCTACACGCA 1909029 Query 119542 TAAACATGT 119550 | | ||||| Sbjct 1909030 TCAGCATGT 1909038 >seq8 Length=2222996 Score = 125 bits (138), Expect = 9e-24 Identities = 301/446 (67%), Gaps = 16/446 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786 || || || || ||||||||||||||||| ||||| ||| | |||| ||| |||||||| Sbjct 705175 TAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGC-AAGCGAGATGTTCTCCAT 705233 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGCTG--GCACTCCAATCTGTTTGAGGA 129842 || || || ||||| | | ||| | | ||| || || | | | | ||| | Sbjct 705234 GAAGTCGAAGGGGTTGGTCGCGTTGTAGACCTTGGTGTTGC-CGAGAGCCAG---GAGCA 705289 Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902 | || || | |||| |||| ||||||| |||| ||||||||| |||| ||| Sbjct 705290 GGCGGTCGGCGACGAACTCGATGTACTGGCACATAAGAGTGGAGTTCATGCCGAGCAGGG 705349 Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962 || || |||||||| || |||| ||||||| ||| | || || | | ||| Sbjct 705350 CGCAGGGCAGCGCGTCAGTGAGGAACTCCTTCTCGATGACAACGGCCTGGGTGATGATAT 705409 Query 129963 CGTGAATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAA 130019 | | | | || | || |||| | | ||| | | | || ||| || ||| | Sbjct 705410 CTTCGACGAGCTTCTTGTCAGGGCGGGTCTTGAGGAGGGAGAAGAGGAGG--CA-GGCGA 705466 Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079 | || ||| | ||||||||||| |||||||| || || |||||| ||||| |||| Sbjct 705467 AGTCAGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCA 705526 Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139 |||| || |||||||| | |||||| || | ||| ||||| ||||||||| |||| Sbjct 705527 TGAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCGCTGAAGAAGATACCCT 705586 Query 130140 CCACACACGCGAACGCAAAGAGACGC 130165 | || ||||| || | ||||||| Sbjct 705587 CGACGGCGGCGAATGCGATGAGACGC 705612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434728443160