Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 304 2e-77 seq8 125 8e-24 >seq4 Length=3244807 Score = 304 bits (336), Expect = 2e-77 Identities = 921/1394 (66%), Gaps = 33/1394 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | ||||| || || | || || || || || || ||||| | Sbjct 1909045 CCACAGCACATGCTGATGCGTGTAGCTGTGGGCATCCACGGCGAGGATATTGAGAAGGCT 1908986 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||||||| |||||| || | || | |||| ||||| | ||||| || || Sbjct 1908985 ATCGAGACCTACGACATGATGTCGCAGAAGT-TCTTCACGCACGCTTCGCCAACACTTTT 1908927 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||| |||||||| || |||||||| ||||||||| |||| || ||||| || Sbjct 1908926 CAATGCGGGTACACCGTCTCCTCAAATGTCGTCTTGCTTCCTGATCGACATGAAGGAAGA 1908867 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | ||| | |||||||| | || | | | ||| || ||||| ||| ||||| Sbjct 1908866 CAGCATCGAGGGTATCTACGACACGTTGAAGACGTGCGCCATGATCTCCAAGACTGCTGG 1908807 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGGA-CA 104518 |||||||| || || | || | | |||| ||| || |||| ||| | Sbjct 1908806 CGGTATTGGTCTGAACGTGCACTGCATTCGTGCCACCGG--CTCATACATCGGAGGAACC 1908749 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || ||| || | ||| | ||||| |||||||| || | ||| ||| || | || Sbjct 1908748 AACGGTACCTCCAACGGTCTCATTCCTATGCTTCGTGTCTACAACAACACTGCTAGGTAC 1908689 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | || | ||| ||||| ||| | |||| |||| || ||||| ||| Sbjct 1908688 GTTGACCAGGGTGGCAACAAGCGTCC---GGGTGCCTTCGCCATCTACCTGGAGCCGTGG 1908632 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| || | | |||||||| ||||| ||||| || | ||||||| || Sbjct 1908631 CACGCAGACGTGTTTAGCTTCCTTGACTTGCGAAAGAACCACGGCAAGGAGGAGGTACG- 1908573 Query 104693 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| || || || |||| ||||| ||| | || || || ||||||||| | || | || Sbjct 1908572 TGCGCGTGACCTGTTCTATGCTCTTTGGGTACCGGACCTGTTCATGAAGCGTGTCCAAGA 1908513 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 || |||| | ||| |||| |||||||| | |||| ||||||||| | |||| | || Sbjct 1908512 GAATGGCGAGTGGACTCTGTTTTGTCCCAGCGAGGCCCCTGGTCTCGCAGATGTCTACGG 1908453 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGAC-TGCGACGG 104870 ||||||||| || || || ||| | | |||||| | || || || | ||| || ||| Sbjct 1908452 TGAGGAGTTCGAGGCTCTGTACGCCAGGTACGAAGCTGAGGGCCGTG-GACGTGAGACCA 1908394 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | | || | || | ||||| | ||||| ||| || |||| || ||||| || | || Sbjct 1908393 TCCGTGC-CCAGAAGCTGTGGTATGCTATCCTCGAGGCTCAGACTGAGACCGGAAACCCC 1908335 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 |||||||| ||||| ||||| || |||| |||||||| || ||||| | || ||| Sbjct 1908334 TACATGCTCTACAAGGACGCTTGCAACCGCAAGAGTAACCAGAAGAACCTCGGAACTATC 1908275 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || ||||| ||||| || || ||| | || | || | | || ||| || || Sbjct 1908274 CGCAGCTCCAACCTCTGCACTGAGATCATCGAGTACACCGCCCCTGACGAGGTCGCCGTA 1908215 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTG 105107 || || || || || |||| ||||| | || ||| || | ||| | || | | |||| Sbjct 1908214 TGCAATCTTGCCTCTCTCGCCCTCCCTAGGTTTGTCGA-CGAGA-AGAATGGCGTGTTTG 1908157 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 | | | || || |||||||| || | | |||||| ||| | |||| | || | Sbjct 1908156 ACTTCCAGAAGCTTCACGAAGTCACTCAGATTGTCACTCGCAACTTGAACAAGATCATCG 1908097 Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 | || |||||||| | |||||||| || | || ||||| || | | Sbjct 1908096 AGGTCAACCACTACCCCGTCCCGGAGGCTCGTAAGAGCAACTTCAGGCACCGGCCCGTCG 1908037 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT-GATTC 105285 |||||||||| || ||||| || ||| ||| | ||| | ||| | || ||| || || Sbjct 1908036 GTCTCGGTGTACAAGGTCTTGCTGATACCTTCCTGTCTCT-TCG-TATGCCTTTCGAATC 1907979 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 ||| || ||| || |||| | || ||||||||||| || ||||| ||| |||| Sbjct 1907978 TCCCGAGGCTAAGAAACTCAACATCCAGATCTTTGAGACCATCTACCACGCAGCT-TTGA 1907920 Query 105346 -GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 || | || |||| ||| || || || || || | ||| || ||||| | Sbjct 1907919 CTTCGTCCTGCGACCTGGCCAAGGAGCTCGGACCGTACGAGACATATGAAGGGTCTCCTG 1907860 Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC-ACTACGAC 105463 ||| || || | || |||| || |||| |||| || | || | | | | ||| Sbjct 1907859 TTTCTCAGGGCATTCTCCAATACGACATGT-GGAACGTCACCCCCACCGACTTGTGGGAC 1907801 Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 |||| || | ||||| || || | ||| | || ||| | | ||| |||| Sbjct 1907800 TGGGCGTCTTTGAAGGAGAAGATTGCCCAGCACGGTGTCCGCAACTCTTTGCTCGTGGCA 1907741 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 || ||||| |||||||| || | || ||| | || | || || ||||| || |||||| Sbjct 1907740 CCCATGCCGACAGCCTCTACTTCGCAGATCCTCGGGTACAACGAGTGCTTCGAGCCCTAC 1907681 Query 105584 ACGACGAACATCTA 105597 || | |||||||| Sbjct 1907680 ACTTCCAACATCTA 1907667 >seq8 Length=2222996 Score = 125 bits (138), Expect = 8e-24 Identities = 156/210 (74%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAG 94788 |||||||| || || | ||||| || || |||||| || ||| | ||| | || Sbjct 705686 ACAGTTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGACAAGAAC 705627 Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848 || |||| || ||| ||| ||||||| || || ||||||||||||||| Sbjct 705626 TCCA---CCTTCGCGACGCGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGC 705570 Query 94849 GGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907 || ||||| |||| | || | |||||||||||||| || |||||||| ||||| ||| Sbjct 705569 GGCTCCTT-TGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTTACCTT 705511 Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 |||||||||||| ||||||||||||||||| Sbjct 705510 CTCCAACGAGCTCATCTCTCGTGACGAGGG 705481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260355263640