Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4 394 1e-104 seq8 143 3e-29 >seq4 Length=3244807 Score = 394 bits (436), Expect = 1e-104 Identities = 916/1371 (67%), Gaps = 24/1371 (2%) Strand=Plus/Plus Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593 ||||||||||| ||||| |||||||| |||||||| ||| | |||||| | || || Sbjct 1907666 GTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGA 1907725 Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653 ||| |||||||||||||| || || | ||| || || | ||| ||| |||| | Sbjct 1907726 GGCTGTCGGCATGGGTGCCACGAGCAAAGAGTTGCGGACACCGTGCTGGGCAATCTTCTC 1907785 Query 78654 CTTTAG----GCC--GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707 ||| | ||| |||||| || || | | | || ||||||||| ||| || Sbjct 1907786 CTTCAAAGACGCCCAGTCCCACAAGTCGGTGGGGGTGACGTTCCACATGTCGTATTGGAG 1907845 Query 78708 GATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAG 78767 || |||| || | || ||||| | | |||||||| | ||| ||||||||| || Sbjct 1907846 AATGCCCTGAGAAACAGGAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCCAG 1907905 Query 78768 TTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTC 78827 ||||| ||| || || |||||||| | | ||| ||||| ||||||| | Sbjct 1907906 GTCGCAGGACGAAGTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTT 1907965 Query 78828 GCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTG 78887 |||| || ||||| | | | || || |||| ||| || || || || Sbjct 1907966 CTTAGCCTCGGGAGATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTG 1908025 Query 78888 GACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTA 78947 || |||| | ||| || ||||| | | ||||||||| || ||| || | ||||| Sbjct 1908026 TACACCGAGACCGACGGGCCGGTGCCTGAAGTTGCTCTTACGAGCCTCCGGGACGGGGTA 1908085 Query 78948 AAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAA 79007 ||| ||||||| ||||| ||| || ||||| | | |||| || |||| | Sbjct 1908086 GTGGTTGACCTCGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAG 1908145 Query 79008 TTTGGCGAAATCAAA------ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGC 79061 || ||| ||||| || || | | || || | || ||| || || || Sbjct 1908146 CTTCTGGAAGTCAAACACGCCATTCTTCTCGTCGACAAACCTAGGGAGGGCGAGAGAGGC 1908205 Query 79062 CAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATT 79121 || ||||| ||||| |||||| ||| | ||||||||| || ||||| | || Sbjct 1908206 AAGATTGCATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTT 1908265 Query 79122 AGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181 || ||| || |||| |||||||||||| ||||| ||| || ||||||||||| Sbjct 1908266 GGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTA 1908325 Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241 | |||||| || | ||||||||| |||| || ||| | | | ||| | | | | Sbjct 1908326 GAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAGCTTCTG 1908385 Query 79242 GGCCCGGACAACCTTCTTGTAC-CGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGA 79300 ||| |||| || | || | || |||| || ||||| | ||||| | | || Sbjct 1908386 GGCACGGATGGTCT-CACGTCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGA 1908444 Query 79301 AAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGT 79360 | |||| || |||||||| | || || ||| |||| || || | ||| ||| Sbjct 1908445 ACTCCTCACCGTAGACATCTGCGAGACCAGGGGCCTCGCTGGGACAAAACAGAGTCCA-- 1908502 Query 79361 CCTCGTCCTTCTCA---ACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGA 79417 |||| | ||||| || || |||||| |||||||| | ||| || || ||| | Sbjct 1908503 -CTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAACA 1908561 Query 79418 GGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGA 79477 |||| || ||| | |||||| | ||| |||||| |||| || || ||| | | Sbjct 1908562 GGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACA 1908621 Query 79478 TGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCT 79537 ||| ||||||||||||||||| ||||||||||| | |||| |||||| ||| |||| Sbjct 1908622 CGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCT 1908681 Query 79538 GGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA 79597 ||| ||||||| || ||||||||| | || || ||||| || | || |||| || | Sbjct 1908682 GGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGG 1908741 Query 79598 CGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCG 79656 ||||| || || ||| || ||| | || |||||| | ||| || | || Sbjct 1908742 TACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATG-CAGTGCACGTTCAGACCA 1908800 Query 79657 ATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCG 79716 || || || | ||||||||| |||||| ||| | ||| |||||||| |||||| Sbjct 1908801 ATACCGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAGATACCCTCG 1908860 Query 79717 ATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGG-GTTGTTCGTACC 79775 || ||| |||||||| ||| ||||||||| |||||| || || | | | ||||| Sbjct 1908861 ATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGT-GTACC 1908919 Query 79776 GGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGT 79835 || ||||| || || |||| ||||||||||||||||| || ||||| ||||| || Sbjct 1908920 CGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGT 1908979 Query 79836 CTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 ||| | | | | || |||||||||||||| || || || ||||| Sbjct 1908980 CTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCAT 1909030 Score = 360 bits (398), Expect = 2e-94 Identities = 1128/1725 (65%), Gaps = 39/1725 (2%) Strand=Plus/Minus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||||| || || || |||||||| ||||| || | | | |||||| |||||| Sbjct 1909030 ATGCGTGTAGCTGTGGGCATCCACGGCGAGGATATTGAGAAGGCTATCGAGACCTACGAC 1908971 Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237 ||||| |||||||||||||||||||| |||| || |||||||| || ||||| | | Sbjct 1908970 ATGATGTCGCAGAAGTTCTTCACGCACGCTTCGCCAACACTTTTCAATGCGGGTAC-ACC 1908912 Query 19238 AAC-CCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCAT 19296 | || || |||||| || ||||| | | |||||||| |||||||| ||||| || Sbjct 1908911 GTCTCCTCAAATGTCGTCTTGCTTCCTGATCGACATGAAGGAAGACAGCATCGAGGGTAT 1908852 Query 19297 CTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCA 19356 |||||| ||| | ||| |||||| ||||||||| | || ||||| || | | Sbjct 1908851 CTACGACACGTTGAAGACGTGCGCCATGATCTCCAAGACTGCTGGCGGTATTGGTCTGAA 1908792 Query 19357 C-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACG 19415 | ||| | || || | | || || ||| || || ||||| || ||| Sbjct 1908791 CGTGCACTGC-ATTCGTGCCACCGGCTCATACATCGGAGGAACCAACGGTACCTCCAACG 1908733 Query 19416 GTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCG 19475 || || | || ||||| || |||| ||||||||| || |||||||| ||||||| ||| Sbjct 1908732 GTCTCATTCCTATGCTTCGTGTCTACAACAACACTGCTAGGTACGTTGACCAGGGTGGCA 1908673 Query 19476 GCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATT 19535 ||| || ||| | |||||||||||||| ||||| |||||||| ||||| | | Sbjct 1908672 ACAAGCGTCCGGGTGCCTTCGCCATCTACCTGGAGCCGTGGCACGCAGACGTGTTTAGCT 1908613 Query 19536 TCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGG 19595 |||| || |||| |||||| || | |||||| | || || ||||| ||| | Sbjct 1908612 TCCTTGACTTGCGAAAGAACCACGGCAAGGAGGAGGTACGTGCGCGTGACCTGTTCTATG 1908553 Query 19596 CCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGA 19655 | | ||| | |||||||| |||||| || || | || | | || ||| ||| Sbjct 1908552 CTCTTTGGGTACCGGACCTGTTCATGAAGCGTGTCCAAGAGAATGGCGAGTGGACTCTGT 1908493 Query 19656 TGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGT 19715 | || || ||| |||||| || | || |||||||| |||| |||| | | ||| Sbjct 1908492 TTTGTCCCAGCGAGGCCCCTGGTCTCGCAGATGTCTACGGTGAGGAGTTCGAGGCTCTGT 1908433 Query 19716 ACCGGACTTACGTAGCCCAGGGCCGGTTCAAG-AAGGTGGTCCGGGCCCGGGACGTCTGG 19774 || | |||| ||| |||||| || | | || |||| |||| | | | ||| Sbjct 1908432 ACGCCAGGTACGAAGCTGAGGGCC-GTGGACGTGAGACCATCCGTGCCCAGAAGCTGTGG 1908374 Query 19775 GACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCC 19834 | ||||| | ||| |||||||| | || |||||| |||||||||||| Sbjct 1908373 TATGCTATCCTCGAGGCTCAGACTGAGACCGGAAACCCCTACATGCTCTACAAGGACGCT 1908314 Query 19835 GCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACT 19894 ||| |||| || ||||||||| |||| | ||| |||||||| || ||| Sbjct 1908313 TGCAACCGCAAGAGTAACCAGAAGAACCTCGGAACTATCCGCAGCTCCAACCTCTGCACT 1908254 Query 19895 GAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGC 19954 || ||||| ||| || || |||||| ||||| || ||||| || || || | Sbjct 1908253 GAGATCATCGAGTACACCGCCCCTGACGAGGTCGCCGTATGCAATCTTGCCTCTCTCGCC 1908194 Query 19955 CTGCCGACTTTCGTC------AAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTG 20008 || || | || ||| ||| | || ||||| || | |||| || Sbjct 1908193 CTCCCTAGGTTTGTCGACGAGAAGAATGGCGTGTTTGACTTCCAGAAGCTTCACGAAGTC 1908134 Query 20009 ACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAG 20068 || | | | ||||| || || |||| ||||||| ||| ||||| | | Sbjct 1908133 ACTCAGATTGTCACTCGCAACTTGAACAAGATCATCGAGGTCAACCACTACCCCGTCCCG 1908074 Query 20069 GCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCC 20128 | ||| || ||| || | | |||||||| ||| |||| || || || || || Sbjct 1908073 GAGGCTCGTAAGAGCAACTTCAGGCACCGGCCCGTCGGTCTCGGTGTACAAGGTCTTGCT 1908014 Query 20129 GACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAG 20188 || ||| || || | | | ||||| |||| |||| | ||||||| Sbjct 1908013 GATACCTTCCTGTCTCTTCGTATGCCTTTCGAATCTCCCGAGGCTAAGAAACTCAACATC 1907954 Query 20189 GGCATCTTCGAGGCCGTGTACCACGCGGCCCT--CCTGGAATCGTGCGAACTCGCCAAAG 20246 ||||| ||| || | |||||||| || | | | | || ||||| || ||||| | Sbjct 1907953 CAGATCTTTGAGACCATCTACCACGCAGCTTTGACTTCG--TCCTGCGACCTGGCCAAGG 1907896 Query 20247 AGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGG 20306 || ||| ||||||||||| | | ||||| || | || |||| || ||||| | Sbjct 1907895 AGCTCGGACCGTACGAGACATATGAAGGGTCTCCTGTTTCTCAGGGCATTCTCCAATACG 1907836 Query 20307 ACATGTGGGGCGTCACTGAGAATGAGTTTTG-----GAGCG-CCCTCAAGGTTGAGATCA 20360 |||||||| |||||| | || || || | ||| | | |||| |||| Sbjct 1907835 ACATGTGGAACGTCACCCCCACCGACTTGTGGGACTGGGCGTCTTTGAAGGAGAAGAT-- 1907778 Query 20361 AGACC--CACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGC 20418 | || ||||| | |||||||| |||||||| || ||||||||||| ||||| || | Sbjct 1907777 TGCCCAGCACGGTGTCCGCAACTCTTTGCTCGTGGCACCCATGCCGACAGCCTCTACTTC 1907718 Query 20419 CCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGTCG 20478 |||||| | ||| |||||||| |||||||| ||||| |||||||||||| ||||| Sbjct 1907717 GCAGATCCTCGGGTACAACGAGTGCTTCGAGCCCTACACTTCCAACATCTACTCTCGTCG 1907658 Query 20479 TACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGG-TCCGCGA----CTTGCAG 20533 |||| ||||||||| || ||| ||| | | ||| | | | | |||| | Sbjct 1907657 CGTGTTGGCTGGTGAGTTC--CA-GGTCGTCAA-CCCTTGGTTGCTCAAGGATCTTGTCG 1907602 Query 20534 AAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAATTGTCCGAGCCGGCGGGAGCGTC 20593 | || | | ||||| ||| || ||||| ||| || | || || | || Sbjct 1907601 -ACATGGGCCTCTGGTCAGACAACATGAAGAACCGAATCATCGCCGATGGTGGTTCCATC 1907543 Query 20594 CAG-GCAT--TGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATC 20650 ||| |||| | || ||| | | |||||| | | |||| |||||| ||||||||| Sbjct 1907542 CAGCGCATCCCCAACATTCCCGATGAGATCAAGGCCCTGTACAAGACCGTTTGGGAAATC 1907483 Query 20651 CCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAG 20710 | ||| | |||||| | ||| | || || || || |||| |||||| ||||| ||| Sbjct 1907482 TCGCAGCGTAACATCATTCAGATGTCCGCTGACCGTGGTGCCTTCATCGATCAGTCTCAG 1907423 Query 20711 TCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTAC 20770 ||||| || | ||| || | || | | ||| ||| | | |||||||| | | Sbjct 1907422 TCGCTGAACATTCATATGAAGGAGCCTACCATGGGCAAGATCACGTCCATGCACTTTGCC 1907363 Query 20771 GGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815 || ||| | ||||| ||||| || ||||||| || || ||| Sbjct 1907362 GGTTGGAAGCTTGGGCTGAAGACTGGATTGTACTACCTACGAACC 1907318 >seq8 Length=2222996 Score = 143 bits (158), Expect = 3e-29 Identities = 310/448 (69%), Gaps = 22/448 (5%) Strand=Plus/Minus Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG-CTAT 60040 |||||||| || || || ||| || || ||||||||| ||||| || || | | || Sbjct 705611 CGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTT-TGCGTCCAT 705553 Query 60041 TTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTC 60100 ||||||||||| ||||||||||||||||| || || | |||||||||||||| || || Sbjct 705552 CTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTC 705493 Query 60101 CCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTATTGGAAAA 60160 || ||||||||| | || || || || || | | || ||| | ||| | | | Sbjct 705492 TCGTGACGAGGGCATGCACACTGACTTCGC-CTGCCTC-CTCTTCTC-CCTCCTCAAGAC 705436 Query 60161 ATGCCCTTCCAAGGATATTCAC-AAGAT-TGTTCA-GTGGGC--TTGTGAAGTGGAGAGC 60215 ||||| |||| | | | ||||| | ||| ||| |||| | | |||| Sbjct 705435 CCGCCCTGACAAGAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCA--TCGAGAAG 705378 Query 60216 GAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACG 60275 |||||| |||| || ||||| || ||| || | || ||| || | ||| Sbjct 705377 GAGTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCACTCTTATGTGC 705318 Query 60276 CAGTACATTCAGTTTGTCGCGGACCGC---CTCATGGCCCAGTTTGGAGAAGGACCAA-- 60330 |||||||| |||| ||||| |||||| ||| |||| | | | | | ||||| Sbjct 705317 CAGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGCTC---TCG--GCAACACCAAGG 705263 Query 60331 TTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCA 60390 | ||| || || ||||| ||||||| ||||||| ||||||| | | || ||||||| Sbjct 705262 TCTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCA 705203 Query 60391 ACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 ||||||| |||||||| ||||| ||||| Sbjct 705202 ACTTCTTCGAGAAGCGCGTCGGCGATTA 705175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524381749840