Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq4 394 1e-104
seq8 143 3e-29
>seq4
Length=3244807
Score = 394 bits (436), Expect = 1e-104
Identities = 916/1371 (67%), Gaps = 24/1371 (2%)
Strand=Plus/Plus
Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593
||||||||||| ||||| |||||||| |||||||| ||| | |||||| | || ||
Sbjct 1907666 GTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGA 1907725
Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653
||| |||||||||||||| || || | ||| || || | ||| ||| |||| |
Sbjct 1907726 GGCTGTCGGCATGGGTGCCACGAGCAAAGAGTTGCGGACACCGTGCTGGGCAATCTTCTC 1907785
Query 78654 CTTTAG----GCC--GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707
||| | ||| |||||| || || | | | || ||||||||| ||| ||
Sbjct 1907786 CTTCAAAGACGCCCAGTCCCACAAGTCGGTGGGGGTGACGTTCCACATGTCGTATTGGAG 1907845
Query 78708 GATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAG 78767
|| |||| || | || ||||| | | |||||||| | ||| ||||||||| ||
Sbjct 1907846 AATGCCCTGAGAAACAGGAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCCAG 1907905
Query 78768 TTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTC 78827
||||| ||| || || |||||||| | | ||| ||||| ||||||| |
Sbjct 1907906 GTCGCAGGACGAAGTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTT 1907965
Query 78828 GCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTG 78887
|||| || ||||| | | | || || |||| ||| || || || ||
Sbjct 1907966 CTTAGCCTCGGGAGATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTG 1908025
Query 78888 GACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTA 78947
|| |||| | ||| || ||||| | | ||||||||| || ||| || | |||||
Sbjct 1908026 TACACCGAGACCGACGGGCCGGTGCCTGAAGTTGCTCTTACGAGCCTCCGGGACGGGGTA 1908085
Query 78948 AAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAA 79007
||| ||||||| ||||| ||| || ||||| | | |||| || |||| |
Sbjct 1908086 GTGGTTGACCTCGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAG 1908145
Query 79008 TTTGGCGAAATCAAA------ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGC 79061
|| ||| ||||| || || | | || || | || ||| || || ||
Sbjct 1908146 CTTCTGGAAGTCAAACACGCCATTCTTCTCGTCGACAAACCTAGGGAGGGCGAGAGAGGC 1908205
Query 79062 CAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATT 79121
|| ||||| ||||| |||||| ||| | ||||||||| || ||||| | ||
Sbjct 1908206 AAGATTGCATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTT 1908265
Query 79122 AGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181
|| ||| || |||| |||||||||||| ||||| ||| || |||||||||||
Sbjct 1908266 GGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTA 1908325
Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241
| |||||| || | ||||||||| |||| || ||| | | | ||| | | | |
Sbjct 1908326 GAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAGCTTCTG 1908385
Query 79242 GGCCCGGACAACCTTCTTGTAC-CGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGA 79300
||| |||| || | || | || |||| || ||||| | ||||| | | ||
Sbjct 1908386 GGCACGGATGGTCT-CACGTCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGA 1908444
Query 79301 AAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGT 79360
| |||| || |||||||| | || || ||| |||| || || | ||| |||
Sbjct 1908445 ACTCCTCACCGTAGACATCTGCGAGACCAGGGGCCTCGCTGGGACAAAACAGAGTCCA-- 1908502
Query 79361 CCTCGTCCTTCTCA---ACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGA 79417
|||| | ||||| || || |||||| |||||||| | ||| || || ||| |
Sbjct 1908503 -CTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAACA 1908561
Query 79418 GGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGA 79477
|||| || ||| | |||||| | ||| |||||| |||| || || ||| | |
Sbjct 1908562 GGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACA 1908621
Query 79478 TGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCT 79537
||| ||||||||||||||||| ||||||||||| | |||| |||||| ||| ||||
Sbjct 1908622 CGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCT 1908681
Query 79538 GGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA 79597
||| ||||||| || ||||||||| | || || ||||| || | || |||| || |
Sbjct 1908682 GGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGG 1908741
Query 79598 CGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCG 79656
||||| || || ||| || ||| | || |||||| | ||| || | ||
Sbjct 1908742 TACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATG-CAGTGCACGTTCAGACCA 1908800
Query 79657 ATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCG 79716
|| || || | ||||||||| |||||| ||| | ||| |||||||| ||||||
Sbjct 1908801 ATACCGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAGATACCCTCG 1908860
Query 79717 ATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGG-GTTGTTCGTACC 79775
|| ||| |||||||| ||| ||||||||| |||||| || || | | | |||||
Sbjct 1908861 ATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGT-GTACC 1908919
Query 79776 GGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGT 79835
|| ||||| || || |||| ||||||||||||||||| || ||||| ||||| ||
Sbjct 1908920 CGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGT 1908979
Query 79836 CTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886
||| | | | | || |||||||||||||| || || || |||||
Sbjct 1908980 CTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCAT 1909030
Score = 360 bits (398), Expect = 2e-94
Identities = 1128/1725 (65%), Gaps = 39/1725 (2%)
Strand=Plus/Minus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177
||||| || || || |||||||| ||||| || | | | |||||| ||||||
Sbjct 1909030 ATGCGTGTAGCTGTGGGCATCCACGGCGAGGATATTGAGAAGGCTATCGAGACCTACGAC 1908971
Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237
||||| |||||||||||||||||||| |||| || |||||||| || ||||| | |
Sbjct 1908970 ATGATGTCGCAGAAGTTCTTCACGCACGCTTCGCCAACACTTTTCAATGCGGGTAC-ACC 1908912
Query 19238 AAC-CCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCAT 19296
| || || |||||| || ||||| | | |||||||| |||||||| ||||| ||
Sbjct 1908911 GTCTCCTCAAATGTCGTCTTGCTTCCTGATCGACATGAAGGAAGACAGCATCGAGGGTAT 1908852
Query 19297 CTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCA 19356
|||||| ||| | ||| |||||| ||||||||| | || ||||| || | |
Sbjct 1908851 CTACGACACGTTGAAGACGTGCGCCATGATCTCCAAGACTGCTGGCGGTATTGGTCTGAA 1908792
Query 19357 C-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACG 19415
| ||| | || || | | || || ||| || || ||||| || |||
Sbjct 1908791 CGTGCACTGC-ATTCGTGCCACCGGCTCATACATCGGAGGAACCAACGGTACCTCCAACG 1908733
Query 19416 GTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCG 19475
|| || | || ||||| || |||| ||||||||| || |||||||| ||||||| |||
Sbjct 1908732 GTCTCATTCCTATGCTTCGTGTCTACAACAACACTGCTAGGTACGTTGACCAGGGTGGCA 1908673
Query 19476 GCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATT 19535
||| || ||| | |||||||||||||| ||||| |||||||| ||||| | |
Sbjct 1908672 ACAAGCGTCCGGGTGCCTTCGCCATCTACCTGGAGCCGTGGCACGCAGACGTGTTTAGCT 1908613
Query 19536 TCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGG 19595
|||| || |||| |||||| || | |||||| | || || ||||| ||| |
Sbjct 1908612 TCCTTGACTTGCGAAAGAACCACGGCAAGGAGGAGGTACGTGCGCGTGACCTGTTCTATG 1908553
Query 19596 CCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGA 19655
| | ||| | |||||||| |||||| || || | || | | || ||| |||
Sbjct 1908552 CTCTTTGGGTACCGGACCTGTTCATGAAGCGTGTCCAAGAGAATGGCGAGTGGACTCTGT 1908493
Query 19656 TGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGT 19715
| || || ||| |||||| || | || |||||||| |||| |||| | | |||
Sbjct 1908492 TTTGTCCCAGCGAGGCCCCTGGTCTCGCAGATGTCTACGGTGAGGAGTTCGAGGCTCTGT 1908433
Query 19716 ACCGGACTTACGTAGCCCAGGGCCGGTTCAAG-AAGGTGGTCCGGGCCCGGGACGTCTGG 19774
|| | |||| ||| |||||| || | | || |||| |||| | | | |||
Sbjct 1908432 ACGCCAGGTACGAAGCTGAGGGCC-GTGGACGTGAGACCATCCGTGCCCAGAAGCTGTGG 1908374
Query 19775 GACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCC 19834
| ||||| | ||| |||||||| | || |||||| ||||||||||||
Sbjct 1908373 TATGCTATCCTCGAGGCTCAGACTGAGACCGGAAACCCCTACATGCTCTACAAGGACGCT 1908314
Query 19835 GCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACT 19894
||| |||| || ||||||||| |||| | ||| |||||||| || |||
Sbjct 1908313 TGCAACCGCAAGAGTAACCAGAAGAACCTCGGAACTATCCGCAGCTCCAACCTCTGCACT 1908254
Query 19895 GAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGC 19954
|| ||||| ||| || || |||||| ||||| || ||||| || || || |
Sbjct 1908253 GAGATCATCGAGTACACCGCCCCTGACGAGGTCGCCGTATGCAATCTTGCCTCTCTCGCC 1908194
Query 19955 CTGCCGACTTTCGTC------AAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTG 20008
|| || | || ||| ||| | || ||||| || | |||| ||
Sbjct 1908193 CTCCCTAGGTTTGTCGACGAGAAGAATGGCGTGTTTGACTTCCAGAAGCTTCACGAAGTC 1908134
Query 20009 ACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAG 20068
|| | | | ||||| || || |||| ||||||| ||| ||||| | |
Sbjct 1908133 ACTCAGATTGTCACTCGCAACTTGAACAAGATCATCGAGGTCAACCACTACCCCGTCCCG 1908074
Query 20069 GCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCC 20128
| ||| || ||| || | | |||||||| ||| |||| || || || || ||
Sbjct 1908073 GAGGCTCGTAAGAGCAACTTCAGGCACCGGCCCGTCGGTCTCGGTGTACAAGGTCTTGCT 1908014
Query 20129 GACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAG 20188
|| ||| || || | | | ||||| |||| |||| | |||||||
Sbjct 1908013 GATACCTTCCTGTCTCTTCGTATGCCTTTCGAATCTCCCGAGGCTAAGAAACTCAACATC 1907954
Query 20189 GGCATCTTCGAGGCCGTGTACCACGCGGCCCT--CCTGGAATCGTGCGAACTCGCCAAAG 20246
||||| ||| || | |||||||| || | | | | || ||||| || ||||| |
Sbjct 1907953 CAGATCTTTGAGACCATCTACCACGCAGCTTTGACTTCG--TCCTGCGACCTGGCCAAGG 1907896
Query 20247 AGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGG 20306
|| ||| ||||||||||| | | ||||| || | || |||| || ||||| |
Sbjct 1907895 AGCTCGGACCGTACGAGACATATGAAGGGTCTCCTGTTTCTCAGGGCATTCTCCAATACG 1907836
Query 20307 ACATGTGGGGCGTCACTGAGAATGAGTTTTG-----GAGCG-CCCTCAAGGTTGAGATCA 20360
|||||||| |||||| | || || || | ||| | | |||| ||||
Sbjct 1907835 ACATGTGGAACGTCACCCCCACCGACTTGTGGGACTGGGCGTCTTTGAAGGAGAAGAT-- 1907778
Query 20361 AGACC--CACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGC 20418
| || ||||| | |||||||| |||||||| || ||||||||||| ||||| || |
Sbjct 1907777 TGCCCAGCACGGTGTCCGCAACTCTTTGCTCGTGGCACCCATGCCGACAGCCTCTACTTC 1907718
Query 20419 CCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGTCG 20478
|||||| | ||| |||||||| |||||||| ||||| |||||||||||| |||||
Sbjct 1907717 GCAGATCCTCGGGTACAACGAGTGCTTCGAGCCCTACACTTCCAACATCTACTCTCGTCG 1907658
Query 20479 TACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGG-TCCGCGA----CTTGCAG 20533
|||| ||||||||| || ||| ||| | | ||| | | | | |||| |
Sbjct 1907657 CGTGTTGGCTGGTGAGTTC--CA-GGTCGTCAA-CCCTTGGTTGCTCAAGGATCTTGTCG 1907602
Query 20534 AAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAATTGTCCGAGCCGGCGGGAGCGTC 20593
| || | | ||||| ||| || ||||| ||| || | || || | ||
Sbjct 1907601 -ACATGGGCCTCTGGTCAGACAACATGAAGAACCGAATCATCGCCGATGGTGGTTCCATC 1907543
Query 20594 CAG-GCAT--TGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATC 20650
||| |||| | || ||| | | |||||| | | |||| |||||| |||||||||
Sbjct 1907542 CAGCGCATCCCCAACATTCCCGATGAGATCAAGGCCCTGTACAAGACCGTTTGGGAAATC 1907483
Query 20651 CCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAG 20710
| ||| | |||||| | ||| | || || || || |||| |||||| ||||| |||
Sbjct 1907482 TCGCAGCGTAACATCATTCAGATGTCCGCTGACCGTGGTGCCTTCATCGATCAGTCTCAG 1907423
Query 20711 TCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTAC 20770
||||| || | ||| || | || | | ||| ||| | | |||||||| | |
Sbjct 1907422 TCGCTGAACATTCATATGAAGGAGCCTACCATGGGCAAGATCACGTCCATGCACTTTGCC 1907363
Query 20771 GGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815
|| ||| | ||||| ||||| || ||||||| || || |||
Sbjct 1907362 GGTTGGAAGCTTGGGCTGAAGACTGGATTGTACTACCTACGAACC 1907318
>seq8
Length=2222996
Score = 143 bits (158), Expect = 3e-29
Identities = 310/448 (69%), Gaps = 22/448 (5%)
Strand=Plus/Minus
Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG-CTAT 60040
|||||||| || || || ||| || || ||||||||| ||||| || || | | ||
Sbjct 705611 CGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTT-TGCGTCCAT 705553
Query 60041 TTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTC 60100
||||||||||| ||||||||||||||||| || || | |||||||||||||| || ||
Sbjct 705552 CTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTC 705493
Query 60101 CCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTATTGGAAAA 60160
|| ||||||||| | || || || || || | | || ||| | ||| | | |
Sbjct 705492 TCGTGACGAGGGCATGCACACTGACTTCGC-CTGCCTC-CTCTTCTC-CCTCCTCAAGAC 705436
Query 60161 ATGCCCTTCCAAGGATATTCAC-AAGAT-TGTTCA-GTGGGC--TTGTGAAGTGGAGAGC 60215
||||| |||| | | | ||||| | ||| ||| |||| | | ||||
Sbjct 705435 CCGCCCTGACAAGAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCA--TCGAGAAG 705378
Query 60216 GAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACG 60275
|||||| |||| || ||||| || ||| || | || ||| || | |||
Sbjct 705377 GAGTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCACTCTTATGTGC 705318
Query 60276 CAGTACATTCAGTTTGTCGCGGACCGC---CTCATGGCCCAGTTTGGAGAAGGACCAA-- 60330
|||||||| |||| ||||| |||||| ||| |||| | | | | | |||||
Sbjct 705317 CAGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGCTC---TCG--GCAACACCAAGG 705263
Query 60331 TTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCA 60390
| ||| || || ||||| ||||||| ||||||| ||||||| | | || |||||||
Sbjct 705262 TCTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCA 705203
Query 60391 ACTTCTTTGAGAAGCGGGTCGGGGATTA 60418
||||||| |||||||| ||||| |||||
Sbjct 705202 ACTTCTTCGAGAAGCGCGTCGGCGATTA 705175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524381749840
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